Gene Pars_0448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0448 
Symbol 
ID5056114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp391851 
End bp392813 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content53% 
IMG OID640468013 
Productinner-membrane translocator 
Protein accessionYP_001152698 
Protein GI145590696 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCCCT ACATCCCCTT GGGGACGTAC CTGCTACTGA TGGCTCTTGC CTTTGTTTTC 
CCCGAGTACT CCAAGCTGAT AGCCTCAATA GCCTTCTTCA TGGCGCTGGG ACAAGCCGGC
AATATCTTCG TTGGCCTCAC CGGCTACGTG AATTTCGGAT TCGTCGCCTT CTTGGCGATG
GGCGCCTACG GGCTCGGCGT CACTGTGTAC TATATAACGT GGCTTGGGAT ACTTGCCCTA
CCTGTCGGCT TGTTGTTGGG GGTAGGCCTA GCAGCAGCAT TAGCCTCTGT AGTAGGCGCC
ATCGCCCTTC GGCTAAGGGG GGCCTACTTC GCCATCGCCA CAATCGGCGT GAACGAGGGA
GTAAAATATC TCATCGTCGG CGCCAATATA TGGGGGGGCG GAGCTGGGCT CATACTCAGC
TCCAGCATGT TCCGTGCCTT TGGCAGAGAG ACGGCCTTAT TTCTCGCCAA CGTGGGCTCC
ACCGTACTGA TTCTTGCAAC CGGCCTAATA GCAGTAGTGG CGATGTACCT AATACAAGCC
GGCAAGGCGG GTTACGCCCT AGCAGCGATA AGACAAGATG AAGATGCCGC CAAGGCCATC
GGGATAAACC CTACGAAATA TAAACTACTA GCATTCATAA CAAGCGCCTC CCTCTCGGGA
CTCCTCGGCG CGGCGTACTT CAGCTTGGGA AATATGCAGA TATTCCCTGA AAACGTCTTC
TTTGTAGACT ACATCCTAGA CGGGCTAGCC GTGATGTTCC TAGGCGGCGC TACCACAGTC
ACGGGGCCAA TTATAGGAGG CTTGATATAT TTTGGCGTGA GGTATCTAGT AGGGATATAC
CTCCCCGGCC TCCAAGCTCT AGTCACAGCC CTTATAGTAT TTGTGGTTGT GGTATTTATG
CCAAAGGGGA TAGTAGGCAC GCTAATAGAT AAAATGCCCA GCCTCAAGTC TTGGTTGCCA
TGA
 
Protein sequence
MRPYIPLGTY LLLMALAFVF PEYSKLIASI AFFMALGQAG NIFVGLTGYV NFGFVAFLAM 
GAYGLGVTVY YITWLGILAL PVGLLLGVGL AAALASVVGA IALRLRGAYF AIATIGVNEG
VKYLIVGANI WGGGAGLILS SSMFRAFGRE TALFLANVGS TVLILATGLI AVVAMYLIQA
GKAGYALAAI RQDEDAAKAI GINPTKYKLL AFITSASLSG LLGAAYFSLG NMQIFPENVF
FVDYILDGLA VMFLGGATTV TGPIIGGLIY FGVRYLVGIY LPGLQALVTA LIVFVVVVFM
PKGIVGTLID KMPSLKSWLP