| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0446 |
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| Symbol | |
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| ID | 5055706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 389804 |
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| End bp | 390982 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640468011 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001152696 |
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| Protein GI | 145590694 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTATTT CTGGTAGATA CGCGGCTGAG GGACAGTACT CGCTGTGGGG GGCGCTTGCT
GTGGTGAACT GGTTTAACGA CAACGGCGGC CTCGACTGCG GCGGGAAGAA GGTCAAGGTT
AAGCTTATCT ACAGAGACAG CGAGTCTAAG CTTGAGCTGG CCCAGAGCAT AACGGAGTCG
CTCATTACCC AGGACAAGGT GCACTTCCTC CTCAGCCCCT ACGGCTCAGA CTTGGCACTT
GGAGTCTCGC CAATCGCCGA GAAATACGGC GTGTTGATGG CCGTGGTCGG CGCGTCCTCG
GACCGCATAT TCCAGCAGGG CTTTAAATAC GTCATCGGCG TCGCCGCGCC CGCCAGCCAG
TACATGGTTC CGGTTCTGGA CATGGTTGTG AAAACCGACC CCACAGTCAA GAAAGTGGCC
ATCCTGTATA GAGACAGCGA GTTTAACAGA CAGGTGGCAG AGGGCGCCAA GGCATATGCC
GAGAAGCTCG GCTTGCAAGT AGTCGTCTAC GAGGTCTACC CATCCTCGCC CAAGGATCTG
ACGCCGCAAA TTCTGAAGGT CAAGCAAGCC GCGCCAGATG TGATCATCGT GGCTTCGCAC
TTCGCCGACG GCCAGCTGGC AGTGCAACAG TTAGCAGAGC AGAAGGTAGA CGCCAAGCTC
GTCGCCCTTT CGGTTGCCCC CCTAGTGCCG GACTTCTACA AAGCGCTAGG CGCCAAGGCC
GAGTGCATAG TGGGGCCGTC CCACTGGGAG CCCGGCGTCA AGTACACGCC CGACCTTGCA
AAGCAGAGGG GCGTCGAGTG GTTTGGCCCC ACTAAGGAGG AGTTCATCAC ATATTTCAAG
AAGGTTGCTA AGCAGATGGG CGGCCAGGAG GTGGACCCCG GCTACCACGC GGCGTGGGCG
GCCGAGGGTG TATTGACAAT CCTATACGGC GTACAGAAGG CTATATCAAC CAAGTCCGAC
AAGGTGCTCG GCGCTTTGCA GAACGCGAGG TTTATGACGT TCTTCGGCGA GTTTAAACTA
GACCCCACCA CTAACCTAAA CGTGGCCCAC TCAATGGTGG TGATCCAGTG GCAGGGAGGC
AACAGATATG TTGTTTGGCC CGCCGTAGTT GCTGAGGGCA AGCTCTTCTA CCCAAGCCTG
ACCTGGGACG AAAAGGCGGC TGGGAAGCTC TGTAAGTAA
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| Protein sequence | MPISGRYAAE GQYSLWGALA VVNWFNDNGG LDCGGKKVKV KLIYRDSESK LELAQSITES
LITQDKVHFL LSPYGSDLAL GVSPIAEKYG VLMAVVGASS DRIFQQGFKY VIGVAAPASQ
YMVPVLDMVV KTDPTVKKVA ILYRDSEFNR QVAEGAKAYA EKLGLQVVVY EVYPSSPKDL
TPQILKVKQA APDVIIVASH FADGQLAVQQ LAEQKVDAKL VALSVAPLVP DFYKALGAKA
ECIVGPSHWE PGVKYTPDLA KQRGVEWFGP TKEEFITYFK KVAKQMGGQE VDPGYHAAWA
AEGVLTILYG VQKAISTKSD KVLGALQNAR FMTFFGEFKL DPTTNLNVAH SMVVIQWQGG
NRYVVWPAVV AEGKLFYPSL TWDEKAAGKL CK
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