Gene Pars_0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0396 
Symbol 
ID5054388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp346613 
End bp347671 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content55% 
IMG OID640467963 
Productalcohol dehydrogenase 
Protein accessionYP_001152650 
Protein GI145590648 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGATTC CCGTCAAAAT AAAAGCGGCG GTATACAAAT CACCCGGCCA GCCGCTTGAG 
CTCTCCGAGA TACCGACCCC AACTCCGGGT GAAGGCGAGG TTTTGATAAA AGTCGCAGCA
ACAGGGGTAT GCCACTCCGA CCTACATGTA TTAGACGGCG AGATGATCCC CCCGCCAGAG
GGCTTCATAC TAGGACACGA GGTATCGGGG TGGGTAGTTG AATTTGGGCC GAGGTGCGAA
AACCCCCACG GCCTCTCCCC AGGCGACCCC GTTGTTGTCT CTTGGATCAT ACCATGCGGC
AAGTGCTACT GGTGCGTCAG AGGACAGGAA AACTACTGCC CATACGCCGC CGCGAGGATG
CCAGGCCTTG TTGGGATCAA CGGAGGACAC GCGGAGTACA TGACAGTGCC TGAGACGGCG
ATATACCCAA TACCAAAAGG ACTCGACGTA CACAACGCCG CGGTCATCTC GTGCGCCTAC
GGCACTGCAT ACAGAGCTTT GAAAGAAGCC GGCGTCGGCC CCGGCACTTC GCTTGTGGTT
GTAGGCGCCG GAGGCGTGGG GTTGGCGGCG GTTGAGCTTG CGGTTGCACT CGGAGCCTAC
CCCATTGTAG CTGTAGACGT GAGAGAGGCT GCGCTGAAAA AAGCCCAGGA GGTCGGCGCC
AGCCATGTGA TAAACGCCGC CGAGAGAAAC GCAATTGGGG CCATAAGAGA AGCGTTGCCC
CAAGGCACTG ACGTGGTCTA CGAGACGAAG CCAAACCCAG ATCTCAAAAT TGCCCTAGAA
GTTGTTAGAA GAGGGGGGAC AATAGTAGTC ACGGGCCTCG GCGCGTCAAC AATTGAGATA
CCGGCAATGC ACCTCGTAAT GAATGGAATA AGAATTGTGG GGAGCCTAGG CTACAAGCCA
CGCACCGACA TACCAGAACT CCTAGCCCTA GCCGCCGTGG GGAAAATAAA GCCTGAAAAA
ATAATCTCAC ATAGGTATAA GCCGGAAAAC ATCAACGAGG CCTACAACAA CCTACGACAA
GGAAAACACC ACCGCGCATT AATCATCTGG AATCCTTAA
 
Protein sequence
MKIPVKIKAA VYKSPGQPLE LSEIPTPTPG EGEVLIKVAA TGVCHSDLHV LDGEMIPPPE 
GFILGHEVSG WVVEFGPRCE NPHGLSPGDP VVVSWIIPCG KCYWCVRGQE NYCPYAAARM
PGLVGINGGH AEYMTVPETA IYPIPKGLDV HNAAVISCAY GTAYRALKEA GVGPGTSLVV
VGAGGVGLAA VELAVALGAY PIVAVDVREA ALKKAQEVGA SHVINAAERN AIGAIREALP
QGTDVVYETK PNPDLKIALE VVRRGGTIVV TGLGASTIEI PAMHLVMNGI RIVGSLGYKP
RTDIPELLAL AAVGKIKPEK IISHRYKPEN INEAYNNLRQ GKHHRALIIW NP