| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0238 |
|---|
| Symbol | |
|---|
| ID | 5054685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 213532 |
|---|
| End bp | 214068 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640467817 |
|---|
| Product | PaREP1 domain-containing protein |
|---|
| Protein accession | YP_001152505 |
|---|
| Protein GI | 145590503 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.904061 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.189081 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATTTTC CCATGCTGGT TAGGCCGTGG CTGGACTTGG CGAGGTACAG GGAGGCGAGG
CTGAAGGAGG CGTTGATCGA GGCGAGGCTG GCCCTGGAGT TTCTGGGAGA CGGCCTGGTG
AGAAATGCCG CGGGTAAGGC TTTCCAGGCC TGGAAGGCCT ATCTCGGGGC GCTCCTCGCT
GATAAGAGGG AGTACTTGAA AGAGCTGTAC CCCGGCTCGA GGAAGATTAT GGTGGGGGAG
GAGGAGGTTG ATGTGGAGGA GGCGGACGTG GTAATCGCTC TGGTGCCTAC GTCGCATATG
GCTAGGCTGG CGGCGGTAGT TGGTGGGGAC GCTGTGGAGC ACACAGCCGT GGCCCTCCAC
CTCCATAGGT ACCAGTACAA CGCCCCCGAC CCAGAGGGCT TCTTCTTGGA TATACCAGAC
GACAGAACCG CGGCCATCTT CATCTGCCGC CTGGCTGGCA GAATAGCGCC CCACGACGAG
CTGTACAAGA GGGTCTGCGG CGTATTAGCG CCGCCCACCG CCGGGCCTAA TGTCTGA
|
|---|
| Protein sequence | MDFPMLVRPW LDLARYREAR LKEALIEARL ALEFLGDGLV RNAAGKAFQA WKAYLGALLA
DKREYLKELY PGSRKIMVGE EEVDVEEADV VIALVPTSHM ARLAAVVGGD AVEHTAVALH
LHRYQYNAPD PEGFFLDIPD DRTAAIFICR LAGRIAPHDE LYKRVCGVLA PPTAGPNV
|
|---|
| |