Gene Pars_0215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0215 
Symbol 
ID5055429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp194210 
End bp194950 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content62% 
IMG OID640467794 
Producthypothetical protein 
Protein accessionYP_001152482 
Protein GI145590480 
COG category[R] General function prediction only 
COG ID[COG1427] Predicted periplasmic solute-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.260844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.647762 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAGTTG TCAGGATAAA GTACGCCCAC AGCGAGCCCC TCTTCTGGCG GGCCAGGCTG 
GAGGTGGTGG AGGGCGGCAA CTTGGAAGCG GCGAGACTCA TAGCCGACTG CGCCGCCGAC
TTGGGCTTTG TGCCGATCAC CTTGGCGGCT GAGTTGGGGC TCCCAATCGT CCCGAGGCTT
GCCATATACG CCGTTGGGCC CATCATCTCG GCTAGGCTCT TCGAGGGGAA AGGCGAGAAG
GGGCCGTGCG CCGTGTCTGA AACCACCGTC AGCGCGAGGG TAGTAAGCCG ATTGATGGGG
ATCTCGTTTA GGAGGGTAGA AGATCCGTGG AGGGGACTTG AGGAATGCTC CCAAGTATTA
GCCGTTGGCG ACGACGCCTT AAAAATGGCA GACGTGGGGG TGAGACACAT AGTCGACGTG
GGGGAGCTGT GGTGGGAGCG GGTGGGGACT CCTCTGTTCT TCGCCGTGCT GGTGGCGAGG
AGGTGGAGCC GCGACGTGGA GGCGGCCGTT GAGGAGATGG AGAACTCCGT GGCGATGTTT
TACGAGAACC CAGTACCGGT AGTGGAGGCC GTGTCGCGCA GACTCGGCGT CAGCAAAAGC
CTTGTGGAGG AGTACTTCCG CCGGTCTCGC TACTTGGTAG GCCCCGACGG GGTGGAGCAT
ATGAGGAGAG AGGCGGAGAT ACTGGGCCTC CCCCCGCTGA GGTTCCTAGA AGCCCACAGC
CCTGACAAAG GCCTCCTCTA A
 
Protein sequence
MRVVRIKYAH SEPLFWRARL EVVEGGNLEA ARLIADCAAD LGFVPITLAA ELGLPIVPRL 
AIYAVGPIIS ARLFEGKGEK GPCAVSETTV SARVVSRLMG ISFRRVEDPW RGLEECSQVL
AVGDDALKMA DVGVRHIVDV GELWWERVGT PLFFAVLVAR RWSRDVEAAV EEMENSVAMF
YENPVPVVEA VSRRLGVSKS LVEEYFRRSR YLVGPDGVEH MRREAEILGL PPLRFLEAHS
PDKGLL