Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_0215 |
Symbol | |
ID | 5055429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | - |
Start bp | 194210 |
End bp | 194950 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640467794 |
Product | hypothetical protein |
Protein accession | YP_001152482 |
Protein GI | 145590480 |
COG category | [R] General function prediction only |
COG ID | [COG1427] Predicted periplasmic solute-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.260844 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.647762 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGAGTTG TCAGGATAAA GTACGCCCAC AGCGAGCCCC TCTTCTGGCG GGCCAGGCTG GAGGTGGTGG AGGGCGGCAA CTTGGAAGCG GCGAGACTCA TAGCCGACTG CGCCGCCGAC TTGGGCTTTG TGCCGATCAC CTTGGCGGCT GAGTTGGGGC TCCCAATCGT CCCGAGGCTT GCCATATACG CCGTTGGGCC CATCATCTCG GCTAGGCTCT TCGAGGGGAA AGGCGAGAAG GGGCCGTGCG CCGTGTCTGA AACCACCGTC AGCGCGAGGG TAGTAAGCCG ATTGATGGGG ATCTCGTTTA GGAGGGTAGA AGATCCGTGG AGGGGACTTG AGGAATGCTC CCAAGTATTA GCCGTTGGCG ACGACGCCTT AAAAATGGCA GACGTGGGGG TGAGACACAT AGTCGACGTG GGGGAGCTGT GGTGGGAGCG GGTGGGGACT CCTCTGTTCT TCGCCGTGCT GGTGGCGAGG AGGTGGAGCC GCGACGTGGA GGCGGCCGTT GAGGAGATGG AGAACTCCGT GGCGATGTTT TACGAGAACC CAGTACCGGT AGTGGAGGCC GTGTCGCGCA GACTCGGCGT CAGCAAAAGC CTTGTGGAGG AGTACTTCCG CCGGTCTCGC TACTTGGTAG GCCCCGACGG GGTGGAGCAT ATGAGGAGAG AGGCGGAGAT ACTGGGCCTC CCCCCGCTGA GGTTCCTAGA AGCCCACAGC CCTGACAAAG GCCTCCTCTA A
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Protein sequence | MRVVRIKYAH SEPLFWRARL EVVEGGNLEA ARLIADCAAD LGFVPITLAA ELGLPIVPRL AIYAVGPIIS ARLFEGKGEK GPCAVSETTV SARVVSRLMG ISFRRVEDPW RGLEECSQVL AVGDDALKMA DVGVRHIVDV GELWWERVGT PLFFAVLVAR RWSRDVEAAV EEMENSVAMF YENPVPVVEA VSRRLGVSKS LVEEYFRRSR YLVGPDGVEH MRREAEILGL PPLRFLEAHS PDKGLL
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