Gene Pars_0185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0185 
Symbol 
ID5056092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp166127 
End bp166981 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content61% 
IMG OID640467764 
Productthiamine monophosphate kinase-like protein 
Protein accessionYP_001152452 
Protein GI145590450 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0611] Thiamine monophosphate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGAAGG GCTTCCTCCG CCGCCTGTTG CAGGAGCTGG GGGCTGAGGA AAACGACGTA 
GTCTATGTAG ACGACCTCGT CGTTAAGGTA GATGGCTCTG CGTCGACTAC CTCTAGGCTC
CCCTTCCAGA CGTGGGAAGA CTTCGGGTGG AAAAACGTCG CCTCCGCCCT CAGCGATCTG
CGAGTCAAAT TCGCAGAGCC CCTCCTCATG CTGGTCTCCG TCACGGCGCC CTTCATGGAC
GTGGCGGAGG AGATAATAGA GGGTGTGAAG GCGGCGGCAA GGCGCTTCTC CTTGCGCTAC
GTAGGCGGCG ACCTAAACGA GGGGGTTGAG GCAGTTGTCG ACGTGGTCAT GGTGGGGAGG
GCCCCCGCAA AGATCGGCAG AGTGCCGAAC CCTGGCGACC TCCTCATCAC GATACCCCTC
TTCGGCTACA CGAGTATCGC GTATAAGTTT TGGCCTGCGG CCGCTCATCC AACCGTGAAG
AGGGGGGTTG AGATGTTAAA GAGGCCTGAA CCTACCTGGC CTCTGCCTCT GCTGGAATGC
GTAACCGCAA GTATGGACTC CAGCGACGGG CTCGCCGATG TCCTCTGGGC TATGGCGAAG
GGTGTGGACA TAGTAGTAAC GCAGCTACCC ACTACTGACG ACGTAGAGGC ATTCGCCGAG
GACCGCCAGC TTGATCTAGA GGAGCTGGTG TTCAACGGCG GGGAGGAGTA CCTCCCCGTA
TTTGCCATAA GGCCCAACTG CGAGGTGAAG CCGCCCTACG TCGCCTTCGC GGAAGTAAGG
CCAGGTCAAG GGAACGTCTG GTGGCGGGAC AAGCCCCTCC CGTGGCGGGG GTGGTCGTAC
TTCCGGCGCG GGTGA
 
Protein sequence
MEKGFLRRLL QELGAEENDV VYVDDLVVKV DGSASTTSRL PFQTWEDFGW KNVASALSDL 
RVKFAEPLLM LVSVTAPFMD VAEEIIEGVK AAARRFSLRY VGGDLNEGVE AVVDVVMVGR
APAKIGRVPN PGDLLITIPL FGYTSIAYKF WPAAAHPTVK RGVEMLKRPE PTWPLPLLEC
VTASMDSSDG LADVLWAMAK GVDIVVTQLP TTDDVEAFAE DRQLDLEELV FNGGEEYLPV
FAIRPNCEVK PPYVAFAEVR PGQGNVWWRD KPLPWRGWSY FRRG