Gene Pars_0135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0135 
Symbol 
ID5055708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp123297 
End bp124106 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content59% 
IMG OID640467714 
Producthypothetical protein 
Protein accessionYP_001152402 
Protein GI145590400 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGCTTG TGGGGAGCCT CGACGGCGTG CCGAGGAAGG TGGTGAGCCT CAACCCCTCC 
GTGAACGAGT TCCTTGCCCT CCTGGGGGTT GAGCTGGCCG GCCGCGACGT GTTTAGCTAC
AGGCCGAGGG AGCTCATGAA GGTGCCAATC ATCGGCACCT TTACAGAGCT GAAGGAGGAC
GCTGTTAGGG CCATTTCGCC TGATCTCACA ATTCTCTACT ACCCAGTGCA GAAGCACCTG
GTAGATGTCG CCGCCCGCTA CTCGAAGGCG GTCGTGGCGG TGCCCACTCC CGTAGATGTA
GATCACGTGG CCTCTATTTT TAGGTTTTTC GCCAAGCTGT TCGACCGCGA CGAGGAGGGC
GAGAGGTTGG CGGGGGCTTA TAGGGACTTG TTGAGGGGTC AACCCCTCTA CGACGGGGTG
CTCGCAGTCA TAAACCTCGG GGCTTACGAC GTGGCTTGTA CCATGTCTTA CGTGGCCGAT
GCATTGACCA AAGCGGGGTT TAGGTATATG CGCGGCCTTC CGTGCGTCTT TAGACACTTC
CCGGAGCCCC CAGCCGAGCT TGTAAGTAGG GCAAAGTTCG TAATCTACGA GGCGAGGGGG
AGGCGCTTCT ACGAGAACGA GGTAGACTTC CTGGGAGGCA AGGAGTTCGT AGTGACGCCT
AACGACACGT TGGCGCACTA CGGCCCCTCT CTGCCGATAG ATCTACAAAT TGTGTGGGGC
GCCGTCTCTA GGGGAGAGAG GTGGGCCGGC CCCACGTCTA GCATGTTGAG GCCAAGCATC
AGGGACAGTT GGTATAAGCC CTATTACTGA
 
Protein sequence
MLLVGSLDGV PRKVVSLNPS VNEFLALLGV ELAGRDVFSY RPRELMKVPI IGTFTELKED 
AVRAISPDLT ILYYPVQKHL VDVAARYSKA VVAVPTPVDV DHVASIFRFF AKLFDRDEEG
ERLAGAYRDL LRGQPLYDGV LAVINLGAYD VACTMSYVAD ALTKAGFRYM RGLPCVFRHF
PEPPAELVSR AKFVIYEARG RRFYENEVDF LGGKEFVVTP NDTLAHYGPS LPIDLQIVWG
AVSRGERWAG PTSSMLRPSI RDSWYKPYY