| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0120 |
|---|
| Symbol | |
|---|
| ID | 5055245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 107883 |
|---|
| End bp | 108899 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640467699 |
|---|
| Product | aminotransferase, class I and II |
|---|
| Protein accession | YP_001152387 |
|---|
| Protein GI | 145590385 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
|---|
| TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCCTC CTCCAGCCGG TGTCCTGAAG CTGGATCAAA ACGAGGTGCC TATTCCCCCT
CCCAGCCACG TTGTGGAGGC GGCGGCTCAG GCCTTGGCCG CGGCCAACTG GTACCAGCCC
GCCGCCCTCT ACGACGAGGT TAGGCAACTC TACGCCGAAT ACGCCGGCGT AGATCCCCAA
CGGGTGTGGC TCTTCCCCGG CGCCGACGAC TTTTTCGAGC CGCTTCTGAG AAGCGCAAAG
ACGGTGGCCG CGCCAAGCCC CACGTACTTC CTCTTCGAGG ACCAGGCCCA GTTCCACGGC
GCCGCGCTGA TCAAGACGCC GCTGAGGGGC GAGGACTTCC GCCTAGACCT CGCCGAGTTT
CTAAACGCCG CCAAGAAGGC AGACGCCGTC TATATAGACA ACCCCAACAA CCCCACCGGC
CAGTTGTTGG TAAAGCCAAG CGAGGTAGAG GAGGTCCTCG CCATCGGAAA GCCAACGGTG
GTGGACGAGG CGTACTTCGA GTTCTCCGGC GTCACCGCCG CCGCACTTGT GGAGGCGTGG
CCCAACCTCG CCGTTGTGAG GACTCTGTCG AAGGCCTTCC TCCTGGCCGG CTTCAGGGTA
ACGCCAGTAA TAGCCGGGCG GGGGTGGAGG ATCCACTACA ACACAGTGAG GTTCAGGGTT
TCCCTCCCCT CCCTCGCCGC GGCTAGGGCG GCGCTTTACA AGAGGGACTA CGTCGAGGAG
GTGGTAAGGC AGATAAGGGA AGGCGCCCGG TACTTGGCAG AGGAGTTGCC AAAACTAGGA
GTGAGGGTCT GGCCTACCCA CGCAAACTTC GTACTAGTCC GGGGCCCGCC GGGCTTCGCC
CAAACGCTGA GAAAATACGG CGTGTGGGTC AGAGACGAGG AGCAAAGGCT TGGACCTGGC
TACGCCAGAA TTACAGTGGG GACAAGAGAG ATAAATGCCC AGCTCGTGAG GACGATAAAA
ACGGCGTTTG CTACTCGGCA ATCTCAGCCA TCATCATCCT CAGCCTCCTC CTCCTGA
|
|---|
| Protein sequence | MLPPPAGVLK LDQNEVPIPP PSHVVEAAAQ ALAAANWYQP AALYDEVRQL YAEYAGVDPQ
RVWLFPGADD FFEPLLRSAK TVAAPSPTYF LFEDQAQFHG AALIKTPLRG EDFRLDLAEF
LNAAKKADAV YIDNPNNPTG QLLVKPSEVE EVLAIGKPTV VDEAYFEFSG VTAAALVEAW
PNLAVVRTLS KAFLLAGFRV TPVIAGRGWR IHYNTVRFRV SLPSLAAARA ALYKRDYVEE
VVRQIREGAR YLAEELPKLG VRVWPTHANF VLVRGPPGFA QTLRKYGVWV RDEEQRLGPG
YARITVGTRE INAQLVRTIK TAFATRQSQP SSSSASSS
|
|---|
| |