Gene Pars_0103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0103 
Symbol 
ID5054627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp90082 
End bp90867 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content54% 
IMG OID640467682 
Producthypothetical protein 
Protein accessionYP_001152370 
Protein GI145590368 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTGTAA ATGGTTGCAC CATACCCAAG TGGCCAGTAG CTGGGGAATC CTACAAACTT 
GCAGGCAAGT CTTGGCTAAG GGCGGTGGAA ACCTTGGTGA AACTCACCTC GGCGTTTCCA
ATGGCCATAC TACTAGGCAG AGCTGGGATG GGGAAGTCCC AAGTAGCCTA CGAGGTGTGC
AAAAGAACAA ACTGCATATA CGTAGACCTC ACAGAGGTGG GGGAGAGGAC TATGCCCAAC
GTAGTGGCCA TCGTGACGTG GCGCCTTCTG TCGAGGTACT GGGACAAAGG AGCAAAAAGT
AGGCTTGTTG AGGTCTACCG GAAGTTCGGC TACGAGGGGC TCCTATCACT AGCCCGGGGT
GACCCTGCGT GGACGCTGAG GTCAGCTCTA GAACTGGCAG GTGGGAGAAC CACCATTGTG
CTAGATGAGC TACTGCCCTC GGCGGAGGAT CCGAAATTTT TCGAAGTGGC CTACATCTTA
CACAGGGTGA GAAACATGCA CCTCTCCAAC GCCTCTTTCC TAGTTACAAT GCTACCTGAG
GTGTACGAAA AAATCGTAGA GCGCATCCCG CCGCTCGGCA ACTTCTTCAT GCACATAACT
GTCCAACTCC CAGACGTGAT ACCGGAAGAC GAGGTCGAAG ACATAGTCTC CGCGTACTGC
ACGGAAAAGG TGGAGCTTGC CCGGAAGATA CTAGCGGAGA GGCCGGACAT AACGGTTCGC
GAGCTTTTAA TGGAGCTTAA CAACATACCC TCTAGGAGGT ACGTCGAGCT GGTACCTGTA
GACTAA
 
Protein sequence
MGVNGCTIPK WPVAGESYKL AGKSWLRAVE TLVKLTSAFP MAILLGRAGM GKSQVAYEVC 
KRTNCIYVDL TEVGERTMPN VVAIVTWRLL SRYWDKGAKS RLVEVYRKFG YEGLLSLARG
DPAWTLRSAL ELAGGRTTIV LDELLPSAED PKFFEVAYIL HRVRNMHLSN ASFLVTMLPE
VYEKIVERIP PLGNFFMHIT VQLPDVIPED EVEDIVSAYC TEKVELARKI LAERPDITVR
ELLMELNNIP SRRYVELVPV D