| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_2250 |
|---|
| Symbol | |
|---|
| ID | 6459619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 2427438 |
|---|
| End bp | 2428403 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642726226 |
|---|
| Product | UDP-glucose 4-epimerase |
|---|
| Protein accession | YP_002016898 |
|---|
| Protein GI | 194335038 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1087] UDP-glucose 4-epimerase |
|---|
| TIGRFAM ID | [TIGR01179] UDP-glucose-4-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTC TGGTGATCGG CGGTGCAGGC TATATCGGTA GTCATGTCGC CCGGGCGTTT
CTCGACAGCG GTTATAGTGT CACGGTTTTC GATAATCTTG CTACCGGGGC AAGAGAGAAC
CTTTTTGAAG AGGCTCAATT TATTCATGGC GATATCATGC AGCCGGATCA TCTGCGCAAG
GCCATGGCTC ATGGATTTGA CGCGTGTGTT CATCTCGCGG CGCTCAAAGC CGCCGGCCAG
TCGATGACGG ATCCCGGATC CTATGCTACG GCTAATATCT GCGGAACGGT CAACATTTTG
AATGCCCTCG TCGAAGCAGG GATTCAAACC CTTATTTTTT CATCTTCAGC AGCCGTTTTT
GGCAGTCCGT CTTTTCTGCC TATCGATGAG GATCATCCGA AGAATCCTGA AAATTTCTAC
GGTTTTACCA AACTTGAGAT AGAGCGTTTG CTTGCATGGT ATGATCGCCT CAAGGGTCTG
AAATATGGCG CGATACGCTA CTTCAACGCA GCTGGCTACG ATGTGGCCGG GCGGATTACC
GGCAGGGAAC AGAATCCGGA AAATCTGCTC CCTGTCGTGA TGGAGGTCGC AGCAGGAATC
CGGCCGCGGT TGTCAATTTT TGGTGATGAC TACCCAACAA GGGATGGTTC CTGTATCCGT
GATTACGTTC ATGTCAACGA TCTGGCCAGA GCGCATGTTT TGGCATTTGA GTATATCCTG
AAGCAGAAGA GGAGCCTGGA GTTGAACCTG GGCAGTGAGC GGGGGGTGAC GGTTCTTGAG
ATGATCAAAA AGGCTCGTGA AATCACCGGT CAGCCTATTG CTGCCGATAT CGCGCCCCGC
CGTCCCGGCG ACCCTGCTGA ACTGGTGGCG TCATCGGCAA AGGCCCTTCG TCTCATAGGC
TGGAAGGCCG AACACAGTGA TGTCGATACC TTGATCAGTT CAACGTGGAG TGTGTATAAG
AAGTGA
|
|---|
| Protein sequence | MKILVIGGAG YIGSHVARAF LDSGYSVTVF DNLATGAREN LFEEAQFIHG DIMQPDHLRK
AMAHGFDACV HLAALKAAGQ SMTDPGSYAT ANICGTVNIL NALVEAGIQT LIFSSSAAVF
GSPSFLPIDE DHPKNPENFY GFTKLEIERL LAWYDRLKGL KYGAIRYFNA AGYDVAGRIT
GREQNPENLL PVVMEVAAGI RPRLSIFGDD YPTRDGSCIR DYVHVNDLAR AHVLAFEYIL
KQKRSLELNL GSERGVTVLE MIKKAREITG QPIAADIAPR RPGDPAELVA SSAKALRLIG
WKAEHSDVDT LISSTWSVYK K
|
|---|
| |