| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_2167 |
|---|
| Symbol | |
|---|
| ID | 6460548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 2341773 |
|---|
| End bp | 2342492 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642726143 |
|---|
| Product | Tetratricopeptide TPR_2 repeat protein |
|---|
| Protein accession | YP_002016816 |
|---|
| Protein GI | 194334956 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.131794 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACACGC ACAAACCATA TACTGCAACT GCAGCTTTTT TGCTCATCGC ATGCTGCTGC
GTTGCTCTGC TTCAGGCCTG CTCAGGAAAA GAAGATCCTG TCACCGGCTT ATGGAAGCTT
CCCGGAGAAG CCATCAGTGT TGAGTTCTCA AAAGAGGGCG ACGTCACGCT GACCATTGAC
GAGTCAACCA TTTCCGGTTC CTTTCGTCGA AATAAGGAAA ACGTGCTGCT TGTCGATATG
GGCAACGGCG AACAACCCGT CACCCTTTCC GACAACGGTG ACGAACTGCG CCTGAGCGAC
AGAAGAGATG ACCGCGATAT TTTTCTGCGC AGCGAAACAG CAGAAAAAGT CGACCGCGCC
GAATCGCTCT TTATGGCCGG CTACCAGGCA AAAAACTGCG ACAGTTCCAT CGTTCTCTAT
ACACAGACAG CAACCATGCT TGAAGGCATT CCATCCGAAT CAGGACATCT GGCCCGCGCC
TATAATAACA GAGGCATCTG CGAAGAAAAA AACGGCAACA CCGAAGCGGC CATGGCTGAT
TATACGAAAG CTATAGAGAT TGATCCAAGA CTTGAAATCG CCTATGGCAA CCGCGCCTGG
CTGCACGACA AGCTTGGCAA CAAAGAAGCA GCAACCCTGG ATTACCGCAA AGCGGCCGAA
CTGGGATACA CCCCGGCAAA ACAGTGGCTT GAAGAACAGA AGCTGGAGCG TGCTGATTAA
|
|---|
| Protein sequence | MHTHKPYTAT AAFLLIACCC VALLQACSGK EDPVTGLWKL PGEAISVEFS KEGDVTLTID
ESTISGSFRR NKENVLLVDM GNGEQPVTLS DNGDELRLSD RRDDRDIFLR SETAEKVDRA
ESLFMAGYQA KNCDSSIVLY TQTATMLEGI PSESGHLARA YNNRGICEEK NGNTEAAMAD
YTKAIEIDPR LEIAYGNRAW LHDKLGNKEA ATLDYRKAAE LGYTPAKQWL EEQKLERAD
|
|---|
| |