Gene Paes_1839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1839 
Symbol 
ID6460219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2009464 
End bp2010303 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content50% 
IMG OID642725823 
Productacetyl-CoA carboxylase, carboxyl transferase, beta subunit 
Protein accessionYP_002016498 
Protein GI194334638 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit 
TIGRFAM ID[TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTGGT TTAAACGCGC AAAGCCTTCG ATTTTTACGA AAGATAAACG GGATATGCCT 
GAGGGGCTGT GGTGGAAATG TGAAAGCTGC GGCGCAATGC TGCATAAAAA ACAGGTTGAA
GACCATTTCT ACACCTGTTG TGAGTGCGGC TACCATTTCA GACTTTCCCC CTATCAGTAC
TTTTCTCTGC TTTTCGATGA AAAGAAATAT GACGAGTTCG ATGACAATCT GCGCGCAGCC
GATCCGCTGC ATTTTTCCGA CACAAGGAAA TATCCGGACC GTGTTCACGA TATTCTCGAA
AAAACGGGAA AAACGGAAGC ATGCCGAAAC GCCATCGGAA GAGTCAGCGG TCATGATCTG
GTGATTTCAG CTATGGATTT CGGGTTCATT GGAGGCTCGA TGGGCTCGGT GGTAGGGGAG
AAAATCTCCC GTGCCGTCTC AAAGAGCATT GAGCACAATG CTCCGCTTCT GATCATATCA
CAGTCCGGCG GGGCCAGGAT GATGGAGGGT GCCTTCAGTC TTATGCAGAT GGCAAAGACC
TCAGCCAGGC TTTCGCAGCT CAGTGCCAGA GGGATTCCAT ATATATCGCT CATGACCAAC
CCGACAATGG GGGGGACAAG CGCTTCCTAT GCCATGCTTG GAGATATTAA TATCAGTGAG
CCGAAAGCAC TGATAGGGTT TGCCGGACCA AGGGTTATCC GCGATACCAT CAAGCGGGAC
CTTCCTGAAG GCTTTCAGCG GGCGGAATTT CTTTTAGAGC ACGGATTTCT GGATTGTATC
GTCCATCGCA GAGATCTGAA ACACCGTCTT TCACAGATCC TCGGTCATCT TTCTTCCTGA
 
Protein sequence
MVWFKRAKPS IFTKDKRDMP EGLWWKCESC GAMLHKKQVE DHFYTCCECG YHFRLSPYQY 
FSLLFDEKKY DEFDDNLRAA DPLHFSDTRK YPDRVHDILE KTGKTEACRN AIGRVSGHDL
VISAMDFGFI GGSMGSVVGE KISRAVSKSI EHNAPLLIIS QSGGARMMEG AFSLMQMAKT
SARLSQLSAR GIPYISLMTN PTMGGTSASY AMLGDINISE PKALIGFAGP RVIRDTIKRD
LPEGFQRAEF LLEHGFLDCI VHRRDLKHRL SQILGHLSS