Gene Paes_1829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1829 
Symbol 
ID6460241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1994842 
End bp1997796 
Gene Length2955 bp 
Protein Length984 aa 
Translation table11 
GC content48% 
IMG OID642725813 
Productpeptidase M16 domain protein 
Protein accessionYP_002016488 
Protein GI194334628 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.661414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATCAC CTTTTTCCGG AAAAAAGCCC TTTTTAAAAG TATTTTTTAC TATCGGTTGC 
CTGATATGGC TCTCGGCATT TCATTTAATT TCCTGTAAAA CAATGAGTTC AGTGAAAGAC
TATTCCTATA CGACGATTCC CGAAGATTCC CTTCATACAA GAATATACCG GCTTGAAAAC
GGCCTGACCG TCTATATGAG TCCCTACCAC AATGAGCCGA GGATCTATAC ATCTATAGCG
GTGAGAGCCG GCAGCAAAAA TGATCCGGCT GAGACAACAG GACTGGCGCA CTATCTTGAA
CACATGCTCT TCAAGGGCAC TGACTCTATC GGCTCGCTGG ACTATGAACG GGAACATATA
GAACTGCAGA AGATTATCGC TCTCTATGAA GAGTACCGTT CCACCGAGGA CCCCGATACA
CGGGCGGAGA TCTATCGTCA GATCGACAGT ACATCAAATA TCGCAGCACA GTACGCCGTT
CCCAATGAAT ATGACAAGTT GCTCAACTCG ATCGGAGCCC GCGGCACGAA TGCGTATACA
TGGGTGGAAC AGACTGTCTA TCTTAACGAC ATTCCTGCCA ATCAGCTGGA CAAGTGGCTC
TCAATCGAAT CTGAACGATT CCGTAATCCT GTCATGCGAC TTTTTCATAC CGAACTCGAG
ACGGTGTATG AGGAAAAGAA CATGACCATG GACAGCGACA GCAGAAAAAT ATGGGAAGCC
CTATACTCCG GCCTGTTTAC CAGGCATACC TATGGAACAC AGACTACCAT CGGTGAAGCG
GAACATCTGA AAAATCCGTC CATACAAAAT GTCATCGACT ACTACAGAAA ATGGTATGTC
CCCAACAATA TGGCGATCTG TCTTGCGGGC GATTTCGATC CCGACGAGAC CATACGCATG
ATTGACGAAA AATTTTCCGT CCTCAAACCC CGCGAACTGC CCGTATTCAA CCCGCCGATC
GAGGAAGAGC TCAGCCAGCC TGTTGCCTCG CATGTCTACG GGCCGGAATC TGAAGAGCTT
GTCATCGGAT TCCGCTTCGA TGGCGCCGAT AGCCGGGATG CCGATTACCT GACGCTTCTG
GATAAAATCC TTCATAACCA GACGGCAGGT CTCATCGACC TGAACCTCAA CCAGGAACAG
CAGGTTCTGG AAGCAGGATC GATGGCCATT CTGATGAAAG ATTATTCGAC GCATATTCTG
AGCGCCAAAC CTCGTGAGGG CCAAAGTCTG GACGACGTCA GAAACCTGCT GCTGGAACAG
CTGGAACTGG TTAAAAAGGG TGAATTTCCC GACTGGCTGC CCGATGCGGT CATCAACGAT
CTGAAAATAG AAGAACTCAA GACATGGGAG TCGAACCGTG GACGTACTGA AGGGTTTGTT
GATGCGTTTA TTTGGGATAT GGACTGGGCT CGCTATGAGA ACCGTATCGA AAGAATGTCG
GCCATTACCA AGGAAGAGAT CATGGCTTTT GCCCGGGAGC ATTACAAAGA GAATTACGTT
GTCGTCTACA AACACCATGG GAAAGACAAG GAAAGCCCGA AAATCGCCAA GCCGCCTATC
ACTCCTCTTT CGGTAAACCG TGACAGCACA TCGCTCTTTG CAAAAGAGCT CCTGGCAAGA
AAAAACACTG CTATCGAACC GGAGTTTCTG GATTTCGACA AGGATATCTC GCGCGAGTCA
ATCACCAGCG ACATCTCTCT CTACTCGGTT CCCAACCGCG AAAACGATCT TTTTTCGCTC
TACTATGTGT TCGATATCGG CACCAACCAT AGCCGCCGGC TGGATATGGC GCTTGATTAC
CTTACCTATC TGGGAACATC GACCGCAACG CCTGCAGCAT TCAACCGGGC GCTCTACCGG
ATCGGGGCCA GCTTCTCGGT CTATACAGCT GATGACCATC TGTATATCAA ACTGTCGGGT
CTTCAGGAGA ACTTCACTGC ATCGATACAA CTGCTTGAAT CGCTTCTTTC CGATGCCAGG
CCTAATGATG AAGCCCTTGA GAAACTGAAA CAGGGCTTGT TGAAAGAACG ATCGGACGAC
AAACTCTCTA AACGTAAAAT CCTGTTTGAG GCGATGAGCA GTTATGCTAA ATATGGCCCG
CAATCGCCAT TTACGAACGT TCTGACCAAC ACTGAACTGC AGCAGATCTC ATCTGATGAA
CTCCTGAGTG AAATCAGCAA TCTGATCCGT TATGAACACC GGGTACTCTA CTACGGGCCG
CAAGAGCCGA AATCACTTGC AAAAGAGCTT CAAGGGCTTC GGCACATGCA GAAGGAGTTA
ATCCCGGTTC CTGCAGAAAC CCCTTTTGAA GAAATCGCTC CGGAAGAGAA TCTCGTGTAT
GTGGTCGATT ACGACATGAC ACAGGCCGAA ATCCTCATGC TCTCGCAGGA CAACCGGTAT
AGCCCGGAAC AGATTCCTCT GATCACCCTG TTCAATGAAT ATTACGGAGG CGGAATGTCC
TCTGTGGTTT TTCAGGAGCT CAGGGAAGCC AAAGCTCTTG CCTATTCGGT CTTTTCGATC
TACCGCATCC CTAAAAACAA GGATGAACAT CACTATATTT TCAGCTATAT CGGAACACAG
GCAGACAAGC TCCCTGAAGC ACTCTCCGGA CTGGGCGAGC TTATGGAAAA GCTGCCGGAA
TCTCCGGAAC TCTTTGCTTC GGCAAAAGCA GGAATTCAGG AGAAAATCCG CACTGAACGG
GTCAAAAGAG AAAAAATTCT CTTTACCCGT GAAGAAGCCT GCAAGCTCGG CATCGATTAT
GATATCAGGA AAAATATCTA TGACCATGTC GGAAATATCA CCTTCGACGA TATCTCACAG
TTCCATAAAG AGCGATTCAA CAGTAAAAAG AGGATCATGA TGGTCCTTGG ACGTATGGAA
AACCTCGATA TGGAGACGCT CGGCCGTTAC GGTACCGTCA AAACGCTGAC ACTGGACGAG
ATCTTCGGCT ACTGA
 
Protein sequence
MRSPFSGKKP FLKVFFTIGC LIWLSAFHLI SCKTMSSVKD YSYTTIPEDS LHTRIYRLEN 
GLTVYMSPYH NEPRIYTSIA VRAGSKNDPA ETTGLAHYLE HMLFKGTDSI GSLDYEREHI
ELQKIIALYE EYRSTEDPDT RAEIYRQIDS TSNIAAQYAV PNEYDKLLNS IGARGTNAYT
WVEQTVYLND IPANQLDKWL SIESERFRNP VMRLFHTELE TVYEEKNMTM DSDSRKIWEA
LYSGLFTRHT YGTQTTIGEA EHLKNPSIQN VIDYYRKWYV PNNMAICLAG DFDPDETIRM
IDEKFSVLKP RELPVFNPPI EEELSQPVAS HVYGPESEEL VIGFRFDGAD SRDADYLTLL
DKILHNQTAG LIDLNLNQEQ QVLEAGSMAI LMKDYSTHIL SAKPREGQSL DDVRNLLLEQ
LELVKKGEFP DWLPDAVIND LKIEELKTWE SNRGRTEGFV DAFIWDMDWA RYENRIERMS
AITKEEIMAF AREHYKENYV VVYKHHGKDK ESPKIAKPPI TPLSVNRDST SLFAKELLAR
KNTAIEPEFL DFDKDISRES ITSDISLYSV PNRENDLFSL YYVFDIGTNH SRRLDMALDY
LTYLGTSTAT PAAFNRALYR IGASFSVYTA DDHLYIKLSG LQENFTASIQ LLESLLSDAR
PNDEALEKLK QGLLKERSDD KLSKRKILFE AMSSYAKYGP QSPFTNVLTN TELQQISSDE
LLSEISNLIR YEHRVLYYGP QEPKSLAKEL QGLRHMQKEL IPVPAETPFE EIAPEENLVY
VVDYDMTQAE ILMLSQDNRY SPEQIPLITL FNEYYGGGMS SVVFQELREA KALAYSVFSI
YRIPKNKDEH HYIFSYIGTQ ADKLPEALSG LGELMEKLPE SPELFASAKA GIQEKIRTER
VKREKILFTR EEACKLGIDY DIRKNIYDHV GNITFDDISQ FHKERFNSKK RIMMVLGRME
NLDMETLGRY GTVKTLTLDE IFGY