Gene Paes_1773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1773 
Symbol 
ID6458880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1932007 
End bp1932780 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content57% 
IMG OID642725757 
Producthypothetical protein 
Protein accessionYP_002016433 
Protein GI194334573 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.278193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0447783 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTC TCCTAACCCT CATTGCCGCG GCATTGATCT GCATGCCTGC GGTATCGCAC 
GCTATCGAGC CGAGCAACAT TCCCCAGACC ATGGTGCCCA ACATTCATGG TAAATCGCTG
ACCACCCCTG TCGCCTGGGG AGCTGCCAAT GGCGTTGTGT TTGCCGGTGT CGGCGGAACC
ATCAACGCTC CGTACACTGA TGAAGCGGAT GGCGCAGCAG CCTTCGGTAT CGGTGTCGGC
GATCCGATCA AAAACCTTGG CGCGCAGATC ACCATTGTCT CGCTCGATCT CGACGGATGG
GAAGAGTACT CGATGGGCGT GCATCTGCAC CACGACTTCG GCGGCGGTAC CGCAGCAGCC
ATCGGTGTTG AAAACGTCAT GCTGACCGAA GGCGGTGACG CCGACAACAG CTTCTATGCC
GTCGTGAGTC ACGGTATGCA GGGCGACATG TTCGTCAGCG ATTCCGGTTC CTCCAGGCTT
CACTTCAGTG TCGGTATCGG CGACGGTCGA TTCGGCGACA AGAGCGACAT GGATATCGCA
ACCGGCAAAG GCAAACACGG CACCTATGTC TTCGGGAACG TCGCTTATGA TATGTTCGAC
GAATTCAACG CCATCGTCGA CTGGAACGGC CTCAACCTCA ACGCTGGCGT GTCGAAAACC
TTCTGGATCG ACAAATATCC TGTAGCCGTC ACCCTCGGTG CAGCAGACCT GACCGACAAC
TCCGGCGACG ACGTCCGCTT TATCTTCGCC GTTGGTACCG GTTTCAAAAT CTAA
 
Protein sequence
MKRLLTLIAA ALICMPAVSH AIEPSNIPQT MVPNIHGKSL TTPVAWGAAN GVVFAGVGGT 
INAPYTDEAD GAAAFGIGVG DPIKNLGAQI TIVSLDLDGW EEYSMGVHLH HDFGGGTAAA
IGVENVMLTE GGDADNSFYA VVSHGMQGDM FVSDSGSSRL HFSVGIGDGR FGDKSDMDIA
TGKGKHGTYV FGNVAYDMFD EFNAIVDWNG LNLNAGVSKT FWIDKYPVAV TLGAADLTDN
SGDDVRFIFA VGTGFKI