Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1712 |
Symbol | |
ID | 6460058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 1871005 |
End bp | 1871949 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642725701 |
Product | P-type conjugative transfer protein TrbG |
Protein accession | YP_002016377 |
Protein GI | 194334517 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000367277 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAAA GGTATATGGT TTCTTCTGGA TTGCTTGCGC TGTGTATGGC GAGTTCGGGA TGCAGTCAGG CGGCTGAAGG GACATTTGTG GAGGCTTCTC CTGTTGCAGA TCGGATGCAG GTGGCGGCGC CTGAGGTTGC GCATTCTTTG CTATCGGAAA ACAGGCTGCT GCGGATTCCT GGAGATGATG AGCGTCGGCC GGTAGCGGGT AAGCCATGGG AGGTTATTGA CGCGGCAAAT CGTTCGGCTG CACAGAATCC CGATAGTGCG GGGTACTTTA ATGCGATTAT GCTCTATGAT TATGTGCCTG GAAGTTTGTT TCAGGTGTAT GCAGCTCCTT TGCGTTTGAC CGATATTCAG TTGCAGCCGG GGGAGAAAAT TGTGGGACAA CCTGCTGCTG GTGATACGGT TCGCTGGATT CTCGGAATCG GGCGCAGTAG AATTGATGGT CAGGAGCAGC AGCATGTGTA TGTGAAAGCA ACCAGACCGG GATTGGAGAC GACACTTGTG ATTACGACGG ACCGTCGGAC CTATCATCTT GAGTTGCACA GTTATCGGGA AACTTACATG GCTGCAGTGC AGTGGCGTTA CCCGCAGGAG GAACTTCGCG TACCGGGAGC TGGGGCGGGG GAAGATGTCG TTGCTTCCGG GGTGGATATC CGTCAACTGA ATTTCGGGTA TGATGTCGAT GTTCGCAAGG GAGGCCGTCC TTCGTGGATG CCGTTGAAGG TGTTTGATGA TGGGCGCAAG ACGTTTATTC AATTCCCTGA TTCTATGTTG GCTGGTGAAG CGCCTGTGCT GTTTGTGGTG TCACGGGAGG GTGATTCGCA ACTGGTGAAT TATCGGGTTA AAGATGAGTT TTTTGTGGTT GACCGGTTGT TTGAGGAGGC GGAACTGCGC ATTGGCAGGA AACGCCAGAA TGTGGTCAGG ATCAGTCGCT TGTAG
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Protein sequence | MSKRYMVSSG LLALCMASSG CSQAAEGTFV EASPVADRMQ VAAPEVAHSL LSENRLLRIP GDDERRPVAG KPWEVIDAAN RSAAQNPDSA GYFNAIMLYD YVPGSLFQVY AAPLRLTDIQ LQPGEKIVGQ PAAGDTVRWI LGIGRSRIDG QEQQHVYVKA TRPGLETTLV ITTDRRTYHL ELHSYRETYM AAVQWRYPQE ELRVPGAGAG EDVVASGVDI RQLNFGYDVD VRKGGRPSWM PLKVFDDGRK TFIQFPDSML AGEAPVLFVV SREGDSQLVN YRVKDEFFVV DRLFEEAELR IGRKRQNVVR ISRL
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