Gene Paes_1694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1694 
Symbol 
ID6459880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1848340 
End bp1849134 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content52% 
IMG OID642725682 
Productprotein of unknown function DUF140 
Protein accessionYP_002016359 
Protein GI194334499 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATAA TAAGTATCGC AGCTCTCGCA TCGAAGGCAA ACCAGTCAAT GAAGGAGTTT 
TTCCTCACCA TGCAGGAATT CTTCTTCTTC TCGGTCAGGG CATTTGTCAC CCTCCCGAAA
CTCAGGCGAT ACTGGCGGGA CTTTCTTGAT CAGGCAACCA TTGCAGGCAC AGACTCCATC
CCTATCGTTC TGGTCAGTTC CATATCTATC GGGGCACTGC TTGCAGTCGA AGTAGGCAAC
CTTCTTGAAG ATTTCGGTGC TAAAACCATG CTCGGGCGCT CTACCGCGTT ATCGGTAATC
CGTGAACTCG GGCCTCTTCT GATGGGCCTG ATGCTCTCGG CACGCTACGG ATCGCGCAAC
GGAGCCGAAC TCGGAGCAAT GAAAATATCG GAACAGATTG ACGCGCTCAG GGCATTCGGA
ACCGACCCGG TAGCAAAACT GGTCATGCCA AGACTTGCCG CAGCACTTAT CGTCTTCATT
CCCCTCACTG CCATCGCCGA CTTTGCCGGT CTGCACAGCG CAGCGTGGCT TGCAGAACAC
TATCACAAGA TTGATCCGGG GATCTTCTGG AACGCGGTCT TCCCCAGACT GGTGCTCAAA
GACTTTGTCG TCGGCTTTCT CAAAGCACCT GTATTTGCGA TCATCATCAC CCTCGTGAGC
AGCTTCAACG GTTTTTCGGC AACAGGAGGC ACCGCAGGTG TCGGCCGATC AACCATCAAA
GGAATTGTCG TATCGTCAGG TCTTATTCTG ATCGCCAATT TTTATGTTTC AAAGATCGTG
CTCGAAAACA TGTAG
 
Protein sequence
MAIISIAALA SKANQSMKEF FLTMQEFFFF SVRAFVTLPK LRRYWRDFLD QATIAGTDSI 
PIVLVSSISI GALLAVEVGN LLEDFGAKTM LGRSTALSVI RELGPLLMGL MLSARYGSRN
GAELGAMKIS EQIDALRAFG TDPVAKLVMP RLAAALIVFI PLTAIADFAG LHSAAWLAEH
YHKIDPGIFW NAVFPRLVLK DFVVGFLKAP VFAIIITLVS SFNGFSATGG TAGVGRSTIK
GIVVSSGLIL IANFYVSKIV LENM