Gene Paes_1640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1640 
Symbol 
ID6458380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1784885 
End bp1785922 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content54% 
IMG OID642725628 
Producthydrogenase expression/formation protein HypE 
Protein accessionYP_002016305 
Protein GI194334445 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0309] Hydrogenase maturation factor 
TIGRFAM ID[TIGR02124] hydrogenase expression/formation protein HypE 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTTG AATGTCCTTT GCCTCAAGCG GATCATGATC GTGTTCAGAT CGCTCATGGC 
GCTGGCGGGA GATTGTCGAG AGAGCTGATG GCAACGGTGT TCATGCCTGC TCTGAACAAT
CCGATGCTTG CCGAACTTGA TGATCAGGCG CGATTGATCC TGCCGCCTGG AAGGGTCGCT
TTTACCACCG ATACCTATGT CATAACACCC CTGTTTTTCC CCGGGGGAAA TATCGGCGAA
CTGGCTGTTC ACGGTACGGT GAATGACCTG GCTGTCGGCG GGGCGGTTCC CAGATTTCTG
AGTGCCGGAT TTGTTCTTGA GGAGGGGTTT CCTCTTGCGG ATTTGCAGCT GATTGTCAGC
AGTCTTGGTC AGGCTGCAGC CAAGGCCGGT GTTTCAGTCG TTACGGGTGA TACAAAAGTT
GTTCAGAAAG GACAGTGCGA CGGGGTTTTT ATCAACACAT CAGGTATTGG CGAGATTCGT
GAAGGTATTG ACGTTTCATG TCGTCATCTT CAACCCGGAG ACCGGCTGAT TCTGTCGGGC
ACTCTCGCCG ATCATGGCAT TGCGGTTCTC TGCGCGCGTG AGGGATTGTC GATGCAGATG
TCGGTAGAGA GTGACTCGGC ATCGTTGAAT GCAATGATAT CGGCAGTTCT GGAGGTCTTT
CCCGGCATCC ACGCGATGCG CGATCCTACG AGAGGCGGTG CGGCGGCGAC GCTTAATGAA
CTGGCTTCAG CTTCAGGTGT AGGGATTGTC CTGGAAGAAG AGGCGATACC GGTACATCCT
GAAGTTCGTG GAGCCTGTGA ATTGCTTGGT ATTGATCCGC TGACTGTCGC AAACGAGGGA
AAGGTCATTA TTGCGGTTCC TTCAAATGGT GCCGATGCAG TCCTTGATGC CTTGCGCCGT
GATGTTCATG GAAAAAATGC CGCGGTGATC GGAGAGGCTG TCGGCGATCA TCCCGGGGTG
GTCGTCATGC GGACTGCATA TGGCAGCAGA AGAGTTGTTG AAATGCCTCT TGGAGAACAA
CTTCCCCGTA TATGCTGA
 
Protein sequence
MQFECPLPQA DHDRVQIAHG AGGRLSRELM ATVFMPALNN PMLAELDDQA RLILPPGRVA 
FTTDTYVITP LFFPGGNIGE LAVHGTVNDL AVGGAVPRFL SAGFVLEEGF PLADLQLIVS
SLGQAAAKAG VSVVTGDTKV VQKGQCDGVF INTSGIGEIR EGIDVSCRHL QPGDRLILSG
TLADHGIAVL CAREGLSMQM SVESDSASLN AMISAVLEVF PGIHAMRDPT RGGAAATLNE
LASASGVGIV LEEEAIPVHP EVRGACELLG IDPLTVANEG KVIIAVPSNG ADAVLDALRR
DVHGKNAAVI GEAVGDHPGV VVMRTAYGSR RVVEMPLGEQ LPRIC