Gene Paes_1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1583 
Symbol 
ID6460163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1724732 
End bp1725352 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content50% 
IMG OID642725571 
ProductGrpE protein 
Protein accessionYP_002016248 
Protein GI194334388 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.852741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.590935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAA AAGCATCAAT GCATAAAGAG GAAAAACATG AAAAGGGGCA GCATAAGCAG 
CCTGCAGATG AACAGCCTCT CGGCATAGAC CCGGAAGTCT CTTCGGGCGA AGCATCCGAA
GGAGCTTGTC AGGAGTCGGA CGCAAAGGTT CAGGAACTCG AAAAGGCCCT CGAAGAGGCT
CAGCAGCAGG CAGAGAAATA TCGTGGTGAA ATGATGCGTT TTGCCGCTGA TTTCGAGAAT
TTCCGTAAAC AGAAAGAGCG GGAGCTTCAA GCAGCAGGAA CCCGGAGTAT CGAGAATACC
ATCAGGGAAC TGCTTCCTCT TGTCGATGAT ATGAAGAGGG TTATGGAGCA TGCTCCCGAT
GATCTGGAGC AGTCCGGGGA GGCTCGTCCG TATTTGGAGG GTGTTGAACT GTTATGGAAG
AATCTTCTGA AATGGTTTGA ACGCAAAGGG GTGAAGCAAA TCGAGGCTTG CGGACAGAAA
CTGGATGTGA ATTTCCATGA AGCCATTACC CAGGTCGATC ATCCGGACGC GGAGCCCGAT
ACGGTGATCG AGGAGTATCA GACCGGCTAT GTTATGGGCG ATAAAGTGCT GCGGCACGCT
AAAGTTATTG TTGCCAGATA A
 
Protein sequence
MSKKASMHKE EKHEKGQHKQ PADEQPLGID PEVSSGEASE GACQESDAKV QELEKALEEA 
QQQAEKYRGE MMRFAADFEN FRKQKERELQ AAGTRSIENT IRELLPLVDD MKRVMEHAPD
DLEQSGEARP YLEGVELLWK NLLKWFERKG VKQIEACGQK LDVNFHEAIT QVDHPDAEPD
TVIEEYQTGY VMGDKVLRHA KVIVAR