Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1577 |
Symbol | |
ID | 6459714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 1717984 |
End bp | 1718664 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642725565 |
Product | ABC transporter related |
Protein accession | YP_002016242 |
Protein GI | 194334382 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.039457 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGAAG CCCGATCGAT TGTCAAAACC TATACCATTC CCGGCCAGGA GACCATCACC ATTCTGCGCG GTGTCAACCT GAACGTCGCC GCAGGTGAAA TGGTGACCAT TGTTGGGGCT TCAGGCAGCG GCAAAACAAC CCTGCTCAAC ATGCTCGGGA CACTCGATAC TCCCGACAGC GGCGATATCA TGTTTAACGG TATGCCGATA CTCAGCAATG GAGGCTTTAC GCTCAACCCC AAAGCCCTCG CCTCATTCAG GAACACCAAA ATCGGTTTTG TCTTTCAGTT TCATCATCTG CTCTCAGACT TCTCCGCGGC CGAAAACGTC GCAATGCCTG AATTCATTGC GACGGGAAAG CTCAAACCTG CGATTGAAAA AGCTGAAGAA CTGCTCCAGA GCCTTGGACT CGGCAACCGC CTCAGCCACC TCCCTTCGGA GCTGTCGGGA GGAGAGCAGC AGAGAGTAGC TATCGCCAGA GCATTGATGA ACTCCCCTAT GATGGTCCTT GCCGATGAAC CAAGCGGCAA CCTCGACAGC AAAAACAGCA GGATCCTCTA CGATTTGATT GCCAAACTCA GCAAGGAACA CAAAACCTCA TTCATCATCG TTACCCATAA TGAGGAATAT GCAGCGACAG CCGACCGTTG TCTGAGCATG GAAGACGGCA TTCTCCATTG A
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Protein sequence | MLEARSIVKT YTIPGQETIT ILRGVNLNVA AGEMVTIVGA SGSGKTTLLN MLGTLDTPDS GDIMFNGMPI LSNGGFTLNP KALASFRNTK IGFVFQFHHL LSDFSAAENV AMPEFIATGK LKPAIEKAEE LLQSLGLGNR LSHLPSELSG GEQQRVAIAR ALMNSPMMVL ADEPSGNLDS KNSRILYDLI AKLSKEHKTS FIIVTHNEEY AATADRCLSM EDGILH
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