Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1570 |
Symbol | |
ID | 6459724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 1709686 |
End bp | 1710639 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642725558 |
Product | methionyl-tRNA formyltransferase |
Protein accession | YP_002016235 |
Protein GI | 194334375 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0223] Methionyl-tRNA formyltransferase |
TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00793908 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGAATTA TTTTTATGGG AACTCCTGAT TTTGCCGTTC CATCGTTGAA GGCTATTGCT GCTATGGACG GGGATTTCGA GGTTCAGCTG GTTGTCACAG GGAAAGACAA GCCAAGGCGA AGCAAGCGAT CTGAACCGGA ACCCACGCCG GTTAAAAAAG CAGCCAGAGA GCTCGGAATA CCTGTTATGG AGGTCGATGA TGTCAAGGAT GAGCGTTTTG TCGATACAGT AGCCCGTTAC CGGCCCGATG TTCTTGTCGT TGCCGCTTTC AGGATTCTTC CTCCCGCCGT CTATGAACAG GCCAGGCTGG GCGCATTCAA TCTTCATGCA TCCATTCTTC CTCGCTACCG GGGCGCAGCT CCGGTGAACT GGGCGATTAT TAACGGCGAG CGGGAGAGTG GTGTGACAAC GTTTTTTCTT CGGAAATCGG TCGATACAGG CAACATGATT CTGCAGGAAA AAACCCCTGT CTATCCCGAA GAAAATGCCG GAGAGCTGGC GGCAAGACTT GCAGAGATCG GGGCAGGCGC TGTTGTTAAG ACGCTTGAGC TGATCCGCGA TGGTCGCGTG GAGCCGTTAT TGCAGAACGA CACTCTGGCA ACCAGAGCGC CGAAACTCTC GACGGAAAAT ACCAGGATCG ACTGGGTACA GCCTGTCGAC GCGCTCTGCG ATTTTATTCG GGGCCTTGCG CCCCGTCCTG CTGCCTGGGC GATATTCAAC CATAAGAAAG TTAAGATTTT CAAGGCATCT GTCGCTGATT TTCATCAGCC TGAAGCCGAA GAGCAGAGCG CTATTCCCGG TAGGATCGCC GTTGAGAATA ACAGGCTTTT TGTTATGGGG CTTGATGGAT GGATCGAAAT TCTCTCCTTG CAGATGGAGG GTAAAAAAGT GATGCAGTCT CATGAGTTCT GCTGCGGGTT TCGCTGTGAT GAGGAGTGTC CGGTATTTTC ATAG
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Protein sequence | MRIIFMGTPD FAVPSLKAIA AMDGDFEVQL VVTGKDKPRR SKRSEPEPTP VKKAARELGI PVMEVDDVKD ERFVDTVARY RPDVLVVAAF RILPPAVYEQ ARLGAFNLHA SILPRYRGAA PVNWAIINGE RESGVTTFFL RKSVDTGNMI LQEKTPVYPE ENAGELAARL AEIGAGAVVK TLELIRDGRV EPLLQNDTLA TRAPKLSTEN TRIDWVQPVD ALCDFIRGLA PRPAAWAIFN HKKVKIFKAS VADFHQPEAE EQSAIPGRIA VENNRLFVMG LDGWIEILSL QMEGKKVMQS HEFCCGFRCD EECPVFS
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