Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1540 |
Symbol | |
ID | 6460391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 1682043 |
End bp | 1682792 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642725530 |
Product | Uroporphyrinogen-III synthase |
Protein accession | YP_002016207 |
Protein GI | 194334347 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.221664 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00271946 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATGAAAT CTGTTCTCGT CACTCGCCCG AAACATCAGG CAGCGTCATT CGTTCAGGAA TTACAGAAAT ACGGTCTGAA CTCTGTTGTC TTTCCGACAA TAGAGATCAG ACCGGCTTCT GACTGGAATA TTCCAGACAT CTCAACCTTT AGCGGCGCAT TTTTCACAAG TCCCAACAGC GTCCGCTATT TTATGGAGCG TCTTACACAA GAGGCTCCTC ATGAGCTTGT CCATCTCAAG GCGATCAAGG TCTACGCTGT GGGAAAAACG ACCGCACGTG ATCTTGCGGC CTACGGTATA ACCACTGAGC CGGTACCGAA AGTCGCCGAT GCCGTCAATC TCATGCAGAC GATCAGCCCT GAAGAAATAA ACGGCAAATC TTTTCTCTTT CTCAAAGGAA ACCTTTCGCT CGGCACAATT CCTGCCGTGA TCTCAGAACG CGGTGGCTCC TGCAGTGCCG TTACCGTGTA TGAAAATCAT CCGCCCGACC TCAACGCGAC CGAAGAGGTA AGGCAACAGA TTGAGAGAGG CGAAATCTCC TGCATTACCT TCACCAGTCC ATCAACTGCG CAAAACTTTT TTCAGGCCAT GGGCACCACA GTACTGCCTG AAGGCATTCT TGTCGCTGCA ATAGGACAGA CCACCGCCAA TGCGCTTGAA AAGCTCGGTG TCAATACTGA CATCATTCCC CGATACTACG ACGCACCTCA CTTCGCAGAA GCAATTGCCG GAGCCCTCCT TAAAGCATAG
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Protein sequence | MMKSVLVTRP KHQAASFVQE LQKYGLNSVV FPTIEIRPAS DWNIPDISTF SGAFFTSPNS VRYFMERLTQ EAPHELVHLK AIKVYAVGKT TARDLAAYGI TTEPVPKVAD AVNLMQTISP EEINGKSFLF LKGNLSLGTI PAVISERGGS CSAVTVYENH PPDLNATEEV RQQIERGEIS CITFTSPSTA QNFFQAMGTT VLPEGILVAA IGQTTANALE KLGVNTDIIP RYYDAPHFAE AIAGALLKA
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