Gene Paes_1535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1535 
Symbol 
ID6458525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1675561 
End bp1676658 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content52% 
IMG OID642725525 
Productchlorophyllide reductase iron protein subunit X 
Protein accessionYP_002016202 
Protein GI194334342 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR02016] chlorophyllide reductase iron protein subunit X 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.292172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0217876 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCAA GAACCATTGC CATTTACGGT AAAGGCGGCA TCGGAAAGAG TTTTACCACA 
ACCAATCTCA GTGCGACCTT TGCCATGATG GGCAAAAAAG TCCTCCAGCT CGGTTGCGAT
CCGAAACATG ACTCCACCAC GTCGCTCTTC GGCGGCATCT CTCTGCCGAC GGTAACAGAT
GTTTTCGCCG AAAAGAATGC GAAAAACCTG AAGGTTGAAA TCAGCGATAT CGTCTTCAAA
AAAGAGATCC CCGGAATCGG TCAGCCGGTC TACGGCATAG AGCTGGGCGG CCCCCAGGTC
GGGCGCGGCT GCGGCGGGCG AGGCATTATT TCGGGATTCG ATGTCCTTGA AAAACTCGGC
ATTTTCACCT GGGATATCGA TATCATACTG ATGGATTTTC TCGGTGACGT TGTCTGCGGC
GGCTTTGCGA CCCCCCTTGC CCGCTCACTG AGCGAAGAGG TCATCCTGTT GACAACCAAC
GACCGCCAGT CTATTTTTAC CGCAAACAAC ATCTGTCAGG CCAACAACTA TTTCAAAACG
GTCGGAGGCC AGTCGAAACT GCTCGGCCTC ATCATTAACC GCGACGACGG CAGTGGCATC
GCTGAAAAAT ATGCCCGTGC AGCAGGGATA AACGTTCTGA TGCAACTACC CTACAATACT
GCAGCGCGCG ACAGAGATGA CAGTTTCGAC TTCGCGGTAA AAATCCCTGA TATAGGAGAG
AAATTCAGAC ACCTCGCCAC CGATATCATC GAACGCCGCA TCCCGCCCTG TGAAGCTGCA
GGACTCGATT TCCCGGAATT TGTGCGGCTC TTCGGCGATG TCAGCAATGC ACTGCCAATT
CCTGCAAAGG CCGAAGAGCT GCAGAAACGC GCCACAGCAA AGCAGCACCC ATCAAACCCT
CCTTCTGCAG TAAACCAGCA GCTGCTTGCC TGTATAGACA ACCTCCCTGA AGAGGAACGG
GAAATCTACG TCATGATGGA AGTAGAAAAA AAAACCACTG CCGAAACCGC AATGCTGAAA
GGCATTGAGG AAGCCGTGGT ATCTGACCTG CTTCAAAGCG CAAGAACACA CCTCAAAAAA
CTTTTCTTCG CAAGCTGA
 
Protein sequence
MKPRTIAIYG KGGIGKSFTT TNLSATFAMM GKKVLQLGCD PKHDSTTSLF GGISLPTVTD 
VFAEKNAKNL KVEISDIVFK KEIPGIGQPV YGIELGGPQV GRGCGGRGII SGFDVLEKLG
IFTWDIDIIL MDFLGDVVCG GFATPLARSL SEEVILLTTN DRQSIFTANN ICQANNYFKT
VGGQSKLLGL IINRDDGSGI AEKYARAAGI NVLMQLPYNT AARDRDDSFD FAVKIPDIGE
KFRHLATDII ERRIPPCEAA GLDFPEFVRL FGDVSNALPI PAKAEELQKR ATAKQHPSNP
PSAVNQQLLA CIDNLPEEER EIYVMMEVEK KTTAETAMLK GIEEAVVSDL LQSARTHLKK
LFFAS