Gene Paes_1510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1510 
Symbol 
ID6458805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1651408 
End bp1652433 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content51% 
IMG OID642725500 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002016177 
Protein GI194334317 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATAAAA TACTTGTTAC CGGCGCAGCC GGTTTTATCG GTTTCCACGT CAGCCGCCGT 
CTGCTTGAAC GCGGCGACGA GGTCGTAGGC ATTGATAACC TGAACAGCTA TTACGATGTT
GCGCTTAAAG AAGCGCGACT TGAAGAACTC GAGCCGTTCG GGCAATTCCG GTTTATCCGT
ATGGACCTGG CCGACAGGGA GGCGATGGAG GACCTTTTTG CTATCGAAAA GTTTGACTAC
GTGGTCAATC TTGCGGCCCA GGCGGGAGTT CGCTACTCAT TGCAGAATCC CCATGCTTAT
ATCGACAGCA ACATTCAGGG GTTTATCAAT ATCCTTGAAG GGTGTCGTCA TAACCATGTG
GGGCATCTGG TCTATGCATC GTCGAGCTCT GTCTATGGTG CGAACGAAAC AATGCCTTTT
TCGGTACATG ACAATGTCGA TCATCCGCTT TCACTCTACG CGGCGACCAA GAAGGCTAAC
GAACTGATGG CGCATACCTA CAGCCATCTT TATCAGATTC CTACAACCGG TCTGCGTTTT
TTCACCGTCT ACGGTCCATG GGGCAGACCC GATATGGCGC TTTTTCTCTT TACAAAGGCT
ATTGTGGAGG GAAAACCGAT CAAGGTTTTC AATTACGGTA AACACCGTCG AGATTTCACC
TTCATCGACG ATATTACGGA AGGGGTTATC AGAACGCTCG ATCATGTCGC TGCCCCCAAT
CCTGAATGGT CCGGCCTCTC TCCCGATCCC GGTTCCAGCA GAGCACCCTG GAGAGTCTAC
AACATCGGTA ACAGCAAGCC GGTCAATCTG ATGGATTATA TCGACGCTCT TGAGCGCGAG
CTTGGCAAAA CCGCCGAGAA GGAGTTTCTG CCCATGCAGC CTGGAGATGT TCCCGATACC
TATGCAGATG TCGATCAGTT GATACAGGAT GTAGACTATC AGCCCAAGAC ACCGGTAGCC
GAAGGGATCG GCAGGTTTGT GGAATGGTAC AGAGGGTATT ACGGCTGTTC GGTGCCAGGG
GACTGA
 
Protein sequence
MNKILVTGAA GFIGFHVSRR LLERGDEVVG IDNLNSYYDV ALKEARLEEL EPFGQFRFIR 
MDLADREAME DLFAIEKFDY VVNLAAQAGV RYSLQNPHAY IDSNIQGFIN ILEGCRHNHV
GHLVYASSSS VYGANETMPF SVHDNVDHPL SLYAATKKAN ELMAHTYSHL YQIPTTGLRF
FTVYGPWGRP DMALFLFTKA IVEGKPIKVF NYGKHRRDFT FIDDITEGVI RTLDHVAAPN
PEWSGLSPDP GSSRAPWRVY NIGNSKPVNL MDYIDALERE LGKTAEKEFL PMQPGDVPDT
YADVDQLIQD VDYQPKTPVA EGIGRFVEWY RGYYGCSVPG D