Gene Paes_1457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1457 
Symbol 
ID6458568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1592022 
End bp1593368 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content52% 
IMG OID642725444 
Productglutamate dehydrogenase 
Protein accessionYP_002016124 
Protein GI194334264 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0334] Glutamate dehydrogenase/leucine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACTA CAGCCTATTG CCTTGAACCC TTTATGGAGT GGATCCAGAC AAAAAATCCA 
GCTGAACCTG AATTTCATCA GGCAGTGTTT GAGGTTGCCA GATCGATCAT TCCATTCGTC
AATGAACACC AGAAATACCA GCAAGCCTGC ATTCTGGAAC GCATGTGCGA GCCCGACAGA
ATCATATCGT TCCGGGTGGT CTGGGAAGAT GACAAAGGCA ATATCCGGAT GAACCGTGGT
CATCGGGTTC AGTTCAACAA CTCTATCGGC CCCTACAAAG GCGGGCTGCG CTTTCATCCG
TCGGTCAACA CCGGCATTCT CAAATTTCTG GGTTTTGAAC AAACCTTTAA AAACAGCCTG
ACGACGTTGC CTATGGGATC GGCAAAAGGG GGATCCGACT TCGACCCGAA AGGAAAATCC
GATCGGGAAA TCATGCGGTT CTGCCAATCC TTCATGACCG AACTGTCTCA TTACATCGGC
CACTTTACCG ACATTCCGGC TGGTGATATC GGCGTTGGCG CCAAAGAAAT AAGCTATCTG
TTCGGTGAAT ACAAACGCCT CAGCCATCAG TTTACAGGGG TGCTGACGGG AAAATCACTC
GAATACGGAG GCAGCCTGAT CAGAAAAGAG GCGACCGGCT ATGGATGTGT CTATTTCATG
GAGGAAATGC TTCATGAGAA AGGCGAATCA ATCAGGGGAA AAACATGCAC GGTCTCGGGT
TCCGGCAATG TCGCGCTTTA CTGTGCACAG AAAATCAATC ATCTTGGAGG AAAAGTCGTC
ACCCTGTCGG ATTCTGACGG ATTTATCCAC ATCCCTCAGG GAATCAGCGA TGAAGAGCTC
GATGCGATCA TTGAGCTGAA AACCTTCAAA AGAGGCAGAC TTGCCGAGTA TGCTGAAAAG
ACCGCCTGCA GCTATTTCGC CGCAGAAAAG CCCTGGGGAA TCGAGTGCGA TCTTGCATTC
CCCTGCGCTA CGGAAAACGA AATCACGAAA AGCGACGCTG CATTACTGGC CGGTGGCGGA
TGTATCGCAC TGGCAGAGGG AGCCAACATG CCAACGACGC AGGATGCACT GGAAGTCCTG
CGCAACAGCG GCATTCTGAC CGCTCCCGGA AAAGCGGCCA ATGCCGGGGG CGTTGCGGTA
TCGGGCCTTG AAATGGCGCA GAACAGCATG AGAATGGCAT GGACGACTCA GGACCTCGAC
AGCCGACTGC AGGCTATCAT GAAAAGCATC CACCAGCAGT GCACAACCTA CGGCAGAACG
AACGGCTACA TCGATTATGT CAAGGGAGCC AACATTGCCG GATTCATCAA GGTGGCAGAT
GCGATGCTTG CCTACGGCAT TCTTTAA
 
Protein sequence
MSTTAYCLEP FMEWIQTKNP AEPEFHQAVF EVARSIIPFV NEHQKYQQAC ILERMCEPDR 
IISFRVVWED DKGNIRMNRG HRVQFNNSIG PYKGGLRFHP SVNTGILKFL GFEQTFKNSL
TTLPMGSAKG GSDFDPKGKS DREIMRFCQS FMTELSHYIG HFTDIPAGDI GVGAKEISYL
FGEYKRLSHQ FTGVLTGKSL EYGGSLIRKE ATGYGCVYFM EEMLHEKGES IRGKTCTVSG
SGNVALYCAQ KINHLGGKVV TLSDSDGFIH IPQGISDEEL DAIIELKTFK RGRLAEYAEK
TACSYFAAEK PWGIECDLAF PCATENEITK SDAALLAGGG CIALAEGANM PTTQDALEVL
RNSGILTAPG KAANAGGVAV SGLEMAQNSM RMAWTTQDLD SRLQAIMKSI HQQCTTYGRT
NGYIDYVKGA NIAGFIKVAD AMLAYGIL