Gene Paes_1417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1417 
Symbol 
ID6459011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1541920 
End bp1542453 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content46% 
IMG OID642725402 
ProductCRISPR-associated protein, Cse2 family 
Protein accessionYP_002016085 
Protein GI194334225 
COG category 
COG ID 
TIGRFAM ID[TIGR02548] CRISPR system CASCADE complex protein CasB/Cse2 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.111839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACG AACCTGAAAC AAAAATCAGC AGGTCTCAGG CATTTGTGCA GTTCATTATT 
GCCTTGATCA AGCAGAATAA GGGCGCCGCT GCAGTACTAC GCCGAGCAGA TAACCCTGCA
ACCGAATACC AAAGCTGGGA GTATTTGGCT GCCTTCAATA TTGACCTGGA AAAGCCCTGG
GAACGCTTGC CGTTTGCTAT AGTCGCGGCA GCGATTGCAA AAGGAAAAAT CGAAAGCAAC
GGATCGATTG GTATAGGCAA TGCCATAGCG CGTAGTTATG AAGATGGAAA TCAAAGTGAT
CAGGCAAAAG CTAAACTGCG ACGCCTGCTT GCTTGCGGCT CCGTCGAGGA AGTATGCAGA
ATTCTTCGTC CTTTGTTCAG TTTGTTCGAA TCCAGAGGAG TTACCCTTAT TAACTATGCA
GGGTTGCTTG AGCAATTGCT GAAATTTCAT TGGGACTGCC AGAGAATCAA AACGCAATGG
GCACAGGAAT TCTACAGGCA AAATCAGAAA ATAGAAACAA AGGAGGCTGT ATGA
 
Protein sequence
MNNEPETKIS RSQAFVQFII ALIKQNKGAA AVLRRADNPA TEYQSWEYLA AFNIDLEKPW 
ERLPFAIVAA AIAKGKIESN GSIGIGNAIA RSYEDGNQSD QAKAKLRRLL ACGSVEEVCR
ILRPLFSLFE SRGVTLINYA GLLEQLLKFH WDCQRIKTQW AQEFYRQNQK IETKEAV