Gene Paes_1373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1373 
Symbol 
ID6458660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1494814 
End bp1495725 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content52% 
IMG OID642725358 
ProductTransketolase domain protein 
Protein accessionYP_002016041 
Protein GI194334181 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3959] Transketolase, N-terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.160442 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAG ATTTAAAACC TTATCCTTCG GGACGGAAAG GTGAGATTAT TTCTCTCGAC 
ACTGTTGATG AACTCAAGGA GATGGCCTGC CAGGTTCGTC GAGATGTGGT CCGGATGCTG
ACTCGGGCGG CTTCAGGTCA TACCGGAGGT TCTCTCGGCA TGGCTGATGT TTTTACGGCA
TTATACTTCA GAATCATGCG CCATGATCCT CACGGTTTCT GGGAAAACCC GGATCAGGAT
ATGCTTTTTC TCTCCAACGG CCATATCGTA CCTGTCTGGT ACAGCGTTCT TGCGCGTTCA
GGTTATTTTC CGACAGAAGA ACTGGATTCT CTGCGCCAGA TAGATAGCTA CCTGCAGGGA
CACCCGACAT CTGACGCCCG GCTTCCCGGG ATCAGAATAG CGTCAGGATC TCTTGGACAG
GGGCTTTCTG CGGCGGTCGG TGCGGCCCTG GGGGTTAAAA TGGACAATCG TGATGCAGAT
GTTTTCTGCC TGATGGGGGA CGGTGAGTGT CAGGAAGGGC AGATATGGGA GGCGGCTATG
AGTGCAACCC ATTATGGTCT CGACAATCTT ATCGGCATTG TCGATTACAA TAAGCTCCAG
ATCGATGGAG AGGTGTGTGA CGTTATGTGC GTTGAGCCTT TCGGCGACAA GTGGAAGGCT
TTCGGATGGG ATGTCTATCA TTGTGACGGT AACGATATCG ATGCCCTGGT CTCGACTGTT
GAAGAGATCC GATCGAGAGA ACAGGCTGTC GGTCCGGCTG TCATTCTTGC TTCTACCGTT
ATGGGGAAAG GTGTTCCGTT TTTCGAAGGT GTCATGCCCG ATAAGTCCAA CTGGCACGGC
AAACCGCCTT CTGCGGATCA TTGCGAGAAA GCTTTGGCGA TTCTTGGTGA AACCTCTTTC
GGCGATTATT GA
 
Protein sequence
MAKDLKPYPS GRKGEIISLD TVDELKEMAC QVRRDVVRML TRAASGHTGG SLGMADVFTA 
LYFRIMRHDP HGFWENPDQD MLFLSNGHIV PVWYSVLARS GYFPTEELDS LRQIDSYLQG
HPTSDARLPG IRIASGSLGQ GLSAAVGAAL GVKMDNRDAD VFCLMGDGEC QEGQIWEAAM
SATHYGLDNL IGIVDYNKLQ IDGEVCDVMC VEPFGDKWKA FGWDVYHCDG NDIDALVSTV
EEIRSREQAV GPAVILASTV MGKGVPFFEG VMPDKSNWHG KPPSADHCEK ALAILGETSF
GDY