Gene Paes_1246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1246 
Symbol 
ID6459295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1349924 
End bp1351105 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content51% 
IMG OID642725234 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_002015919 
Protein GI194334059 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.404887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.363683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAATT CTGCATTTAC TCTTCTTCGT CAGCCCAATG TTATTTTTGG TCCGGGAAAG 
GTTCGGCTTC TCCCGGATCT TATTGCCGGT TACGGCAGAA ATGTACTGGT CGTTACCGGT
GTCAGCACTC TCGAGCAATC AGGAGTTCTT GGAAAACTTT TTGAGCAGCT ACATTCCCGC
TCTCTGCAGT ATGGTCATCT GACGGTCTCA CGGGAGCCTC ATCCTGAACT CGTCGACCGT
GCTGTCAGCC GCTACAGGGA GAGCGGGATT GATGTTGTTG TTGCTATCGG AGGAGGGAGC
GTTATTGATG CCGGCAAATC GGTTTCTGCA ATGCTGCTGA AATCAGATTC GATCGAACGA
TATATCGAAG GGCTGGATGG TTGTATTCAG CATGATGGTC GTAAGGTGCC GTTTATCGCG
CTTCCGACAA CTTCGGGTAC GGGAAGCGAA GCGACAAATA ACGCTGTTAT CAGTAAGGTT
GGAGTCGATG GGTACAAGCG TTCTCTTCGC CACCCTGAAT TCGTTCCGGA GATTGCGCTT
GTCGATCCGG AACTTATGCT TGGCGCGCCT GCAGGTCTGA CTGCCGCATC CGGCATGGAT
GCAGGAACAC AACTTATAGA GGCTTTTGTT TCTCCGGGTT CCTGCCGGTT TACCGATGTT
GTCGCATGGA GCGGTCTTGA ACATTTCAAT CGTTCGTTTC TTCGGGCCTG CACTGATGGA
GCCGGAGATA TTGAGGTCAG ATCCGCTATG GCATATGCGG CGTTGATGTC GGGAATTGCT
CTTGCAAACG CAGGGCTTGG GATCGTTCAC GGATTTGCAT CTTCGGTTGG CGGATACTGC
GATATAGCTC ATGGTGTTCT TTGCGCGACT CTTCTCGCCT CAGCCACAAA AGAAAATATT
CTGCAATTAC GCCAGACGGG GGATAACCCT GAAGCGCTCA CTAAATATGC GGCAATTGGC
AGATTGTTCT CCGGTTGCGA AAATCTGTCG CAGGATGGAG CTTGTGATGC GCTGGTTGAT
ACGTTGCTGA GTTGGCAGGA GCAGCTTGAT TTTCCTCGTC TTTCTTCTTA TGGATTGAGA
TCCAGTGACC TTGAATCCAT CGCCAGTCGG ACACGAAGCA AAAACAATGC AGTGGAGCTG
CATCGCGATC AGTATATGAG CATATTGCGA GCACGCTTAT AG
 
Protein sequence
MDNSAFTLLR QPNVIFGPGK VRLLPDLIAG YGRNVLVVTG VSTLEQSGVL GKLFEQLHSR 
SLQYGHLTVS REPHPELVDR AVSRYRESGI DVVVAIGGGS VIDAGKSVSA MLLKSDSIER
YIEGLDGCIQ HDGRKVPFIA LPTTSGTGSE ATNNAVISKV GVDGYKRSLR HPEFVPEIAL
VDPELMLGAP AGLTAASGMD AGTQLIEAFV SPGSCRFTDV VAWSGLEHFN RSFLRACTDG
AGDIEVRSAM AYAALMSGIA LANAGLGIVH GFASSVGGYC DIAHGVLCAT LLASATKENI
LQLRQTGDNP EALTKYAAIG RLFSGCENLS QDGACDALVD TLLSWQEQLD FPRLSSYGLR
SSDLESIASR TRSKNNAVEL HRDQYMSILR ARL