Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1240 |
Symbol | |
ID | 6458794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 1347442 |
End bp | 1347912 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642725228 |
Product | nuclear protein SET |
Protein accession | YP_002015913 |
Protein GI | 194334053 |
COG category | [R] General function prediction only |
COG ID | [COG2940] Proteins containing SET domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.320188 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACCAT CACTTTTCTC CCTTTTCATC ATTGTTTTCG CGAGCGGTCT GGGACTCGGA TTCATCATTG GAAAATCATA CAGAAAACAC ACGGAAAAAC AAGAGATCCG ACTGGTACGA GTGGGGCGAT CAAATGTGAG TGGCAGAGGC GTTTTCGCAA TCAATAACAT AGCACAGGGC GATATTATTG AGCGATGCCC CGTTCTTGAA CTCGACGAAA ACGATGTAGG CGGAGAACTG ATGAACTATG TTTTTTACGG CGACGATGAA TCAACACGGC TTGTCGCGAT GGGCAACGGC ATGCTGTTCA ATCACTCGTC TTTCCCGAAT GTAGGGTACT ACCTGGACGA AACCCCGCTG GGGGCAGAGC TCGTCATCTA TGCCTTGAGA AACATCAGAA AAGATGAAGA ACTGTTTTAC AACTACGGTG ATGCCTGGTG GACCAGCCGT AACATGACGG ATAAGAACTA A
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Protein sequence | MEPSLFSLFI IVFASGLGLG FIIGKSYRKH TEKQEIRLVR VGRSNVSGRG VFAINNIAQG DIIERCPVLE LDENDVGGEL MNYVFYGDDE STRLVAMGNG MLFNHSSFPN VGYYLDETPL GAELVIYALR NIRKDEELFY NYGDAWWTSR NMTDKN
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