Gene Paes_1240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1240 
Symbol 
ID6458794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1347442 
End bp1347912 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content48% 
IMG OID642725228 
Productnuclear protein SET 
Protein accessionYP_002015913 
Protein GI194334053 
COG category[R] General function prediction only 
COG ID[COG2940] Proteins containing SET domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.320188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCAT CACTTTTCTC CCTTTTCATC ATTGTTTTCG CGAGCGGTCT GGGACTCGGA 
TTCATCATTG GAAAATCATA CAGAAAACAC ACGGAAAAAC AAGAGATCCG ACTGGTACGA
GTGGGGCGAT CAAATGTGAG TGGCAGAGGC GTTTTCGCAA TCAATAACAT AGCACAGGGC
GATATTATTG AGCGATGCCC CGTTCTTGAA CTCGACGAAA ACGATGTAGG CGGAGAACTG
ATGAACTATG TTTTTTACGG CGACGATGAA TCAACACGGC TTGTCGCGAT GGGCAACGGC
ATGCTGTTCA ATCACTCGTC TTTCCCGAAT GTAGGGTACT ACCTGGACGA AACCCCGCTG
GGGGCAGAGC TCGTCATCTA TGCCTTGAGA AACATCAGAA AAGATGAAGA ACTGTTTTAC
AACTACGGTG ATGCCTGGTG GACCAGCCGT AACATGACGG ATAAGAACTA A
 
Protein sequence
MEPSLFSLFI IVFASGLGLG FIIGKSYRKH TEKQEIRLVR VGRSNVSGRG VFAINNIAQG 
DIIERCPVLE LDENDVGGEL MNYVFYGDDE STRLVAMGNG MLFNHSSFPN VGYYLDETPL
GAELVIYALR NIRKDEELFY NYGDAWWTSR NMTDKN