Gene Paes_1163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1163 
Symbol 
ID6459562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1271708 
End bp1273009 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content47% 
IMG OID642725154 
Productradical SAM domain protein 
Protein accessionYP_002015839 
Protein GI194333979 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1509] Lysine 2,3-aminomutase 
TIGRFAM ID[TIGR00238] KamA family protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.587423 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAAT ATCGTTCCTA TACAGCAGCG AACATTCATG AGCTCCCGCA ATACAGAGCT 
CTCAGTGACG AACAGATTCA TACCATTAAA ACCGTGGCGA CAGTCTATCC ATTCAGGATA
AACAATCACG TCGCAGAAAA CCTGATTGAC TGGTCAGCCG TTCCGGACGA TCCGGTATTT
CGCCTGAGCT TCCCCCAGGC TGGAATGCTT CAGGATAAAG AGTTTAATGA TCTTTCCGGC
TTAATCCGCT CAGGAAAAGA CAAAACCATC ATTCAGCGGA CAGCAAGGCA GATCATGCTG
CGTCAGAATC CCAATCCCGC AGGACAGATG GAGCTCAACA CTCCTCAACT CGACGGAATA
GCCCTGCACG GCATGCAGCA CAAGTACCGT GAAAGCGTCC TTTTCTTCCC ATCCGAAGCC
CAGGTGTGCC ATGCATACTG CACATACTGT TTCCGCTGGC CTCAGTTCTC AGGGCTTGAC
AATCTTAAAT TTGCCAACCA CGACGTCTCA AGGCTCATCA GCTATCTCAA AGAGCACCCT
GAAGTCAAGG ACATCATTTT TACCGGTGGC GATCCGATGG TTATGTCCTC GCAACTGCTC
CGAAAGTATA TTGAGCCTTT GCTCAAGATT CCCGCGATCA GGACAATTCG CATAGGAACG
AAGTCATTGA GCTGGTGGCC GTACCGCTTT ACAACCGACA CAGATGCCGA TGACATTCTT
CGGCTCTTTG AAAAGATCGT CCATGCAGGC AAACACCTTG CCATCATGGC CCATATCAGC
CATCCGGGAG AAATCGAAAA TCCTGCTGCA CTTGACGCAA TAACCCGTAT TCGATCCACA
GGCGCCGTCA TACGCAGTCA GTCGCCGATT GTGCGTTATA TCAACGACAA TGCGCAAACA
TGGGAAGCGA TGTGGCAAAA ACAGCTCCAT CTCGGCATTA TCCCCTATTA CATGTTTCTT
GAAAGGGATA CCGGGCCAAA GCACTATTTC GATGTCCCGC TTCATGAAGC CCTCAACATT
TTTAATACGG CCTACAGAAA AATGTCCGGC CTTGGAAGAA CTGTTCGTGG ACCTTCAATG
TCTTGCTCGC CCGGCAAAAT CATTGTCGAA GACATTACAG AAATTGACGA AAAAAAAGTA
TTCGTTCTGA AGTTCACACA AAGCAGAGAT CCCGAATGGA CAAACCAGTT ATTCTTTGCA
GAATATGATG AATCAGCATC ATGGATTGAT GACCTCAAGC CCGCATTTGG ATCAAATAAA
TTCTTTTTTG AAGAAGAAAT GACAGAAATG ATGAGAGCTT AA
 
Protein sequence
MLKYRSYTAA NIHELPQYRA LSDEQIHTIK TVATVYPFRI NNHVAENLID WSAVPDDPVF 
RLSFPQAGML QDKEFNDLSG LIRSGKDKTI IQRTARQIML RQNPNPAGQM ELNTPQLDGI
ALHGMQHKYR ESVLFFPSEA QVCHAYCTYC FRWPQFSGLD NLKFANHDVS RLISYLKEHP
EVKDIIFTGG DPMVMSSQLL RKYIEPLLKI PAIRTIRIGT KSLSWWPYRF TTDTDADDIL
RLFEKIVHAG KHLAIMAHIS HPGEIENPAA LDAITRIRST GAVIRSQSPI VRYINDNAQT
WEAMWQKQLH LGIIPYYMFL ERDTGPKHYF DVPLHEALNI FNTAYRKMSG LGRTVRGPSM
SCSPGKIIVE DITEIDEKKV FVLKFTQSRD PEWTNQLFFA EYDESASWID DLKPAFGSNK
FFFEEEMTEM MRA