Gene Paes_1161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1161 
Symbol 
ID6460161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1267806 
End bp1270442 
Gene Length2637 bp 
Protein Length878 aa 
Translation table11 
GC content53% 
IMG OID642725152 
Producthypothetical protein 
Protein accessionYP_002015837 
Protein GI194333977 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATTA TTTTCGGTCT GCATCTCGAT AGCCAGAGGA GCTGGAAAAA ACGCGATGCA 
TTCGGGCATC TTGAACTTGG TCCCTCAGGC TTGCTATCCC AGCTTGAGCA GTATCTTGGT
CTTTCCTCTC CCCCGGCAGT GAAACTCCAT CGACTGATTC ACTATCGCAG CATTCTGCAG
CGTCTCGATA ACGGCAGCAG GTTCTATAGC CGTTCGATGC AGGTCGATGA TTTTGGGGTT
GCATCCGCCC TTCTTGACAT GAGAGACGAT CTCTATCTTC ACGGCTGGGA TGGCTCGTAC
CGGCATCGAC CGGTTACGAA ACGTCTTTCC GACCTTGCCG AGATAGAACG TGCGCTTCTC
GAGGAAGAGG GATTCGAGCC TTGTAATGGG GAACGTTTGA TGTCGGTGTT GGAGGCATTG
AAGGTGTTGC GAACTCCCAT TACCGTTCTA AGGCTTCTGG AGCCTCTTGA TCATCATCCC
CGTCGGTGGC AGGAGGTGAT CCGGTTGCTT CCGTTCTCAT ATTCCAATGC GTTTGACCGG
CCGCTTGCCC GCGAGGGTTC CTCCCTGGCC TGTCTCCAGA AGCGTTTGCT AACTGATTCG
CATTCATCCT CTGATCCGAA GGATATCGCA GACGCAAGCA TTCGGGTATT GACTGCAGAT
ACGGCTCTTG CCGCAGCCTA TTACGCGACA GCGACGTTAT CGGCTTCGGC CGATGATGTT
CTGCTCGTGC ACGATGGTAA AGCCGGTTTA CTGGATGATG TGCTTGCTGC AGAACATTTT
CCTCAACAGG CTTTTTCGCA TTCATCTTCG TCACGTCCGG CATTGCAGCT CCTTCCACTG
GCTCTTCGTC TTACTTTTCG CCCTCTTGAT ATTTCAGCTC TTCTTGCGTT TCTGACCCTT
CCTGCCGGCA TCAATCCTGT TCATCCCGTT CTGCGGGAGC GGATCGTCAG TATTGTTTCG
CGTTATCCCG GAATTGGAGG AGAGGCATGG GTCAAAACCC TGATTGAATT TCGCAATGAG
GGCGGAGAAG ACGCTGATTC TAGCGTAAAG AGCTTTCTCG AATGGGTTGA TGGAGCTACG
CAAGACCGGC ATGACGGTAT GACGTCCGGA CAGCTTATAG CGGTTACTTG TCGTGTAACC
AATTTTTTTG ATGAGCAGGT CAGGAGCCTC TCGGATGACT TGCTGAAAGA GGCCTGTTCG
GCAGGTCTGG AGCAGGCGTC AGATTTTCTG TCTGCGCTCA AGACCATTCA ACAGCATGGA
ACCTGCTGGC TGAGTATCTA TCAGATCGAG CAACTGCTGT CGAAAACGGG AGAAAAAAGC
AGTCGAAAGT CCCTTTACGT TCGTCAGGCA GGGAGCGTTC CGGACGCATC CTGTCCTGGA
GGTGTCTGCG AACCCTCTTC TCATGTGTTC TGGTGGTGGA TGGCTGCGCC GTTGATTGAG
CAAGGCGGGA TATGGTCTTC CAGAGAGCGG GTTTTTCTTG AAGGTGAAGG GATTGTGTTT
CCCTCTCAGG AGCAGAAGCT TCTTTGGCAG GAGGAAGAGT GGAAGCGTCC TGTTCTTGCT
GCACGTCACT CTTTGACGCT GTTGCTGCCT CCGGACGAAA CGAAACGCCA TCCGCTCTGG
ATGAAAATAG CATCGCTTTT TCCCTCGATA CCTGTCATGC AGATCGAACA CCCGCAAACA
ACAGGCATAG CGTGTACACC TATTGTTCAG AGGCCTCTTG TTGCCCGCAA ACCATTCTGG
AGTGTTCCTG GAATAGTCCT TGGCAAAAAG CAGTCATTTT CACCGACATC CCTGGAGAAG
CTCATTGCTG ATCCCTGCCA ATGGTTTCTT GAATACGAGG CAAAGCTGTC GCCGTCAAAG
GTTCTCGATG TCAGTGATGG TCCGAGGCTC TACGGCCTTC TTTTTCATCG TATGGTCCAG
AAGCTTTGCC CGGTTCTCCA TGGTGGCAGC GTTACTATGA GCTCGATTGA TGCATGGTTC
GATGAGTGTT TTGCGATTCT CGTCAAACAG GAGGGAGCGG TGCTTTTGAT GGAAGGCCGA
AACGCGGACC TTGAAGGCCT CAGGCTCCGT ATTCGTCATG CCTTGCATCA CCTTGTTCCT
GTTCTGGTAA GGCAGGGGGC CCGCAGTATT GTTGCAGAGC AGCGTTTGGA TGGGCGCTTT
GCGGGAGGCA ACCTCTACGG TTATATCGAT ATTCTGCTTC ATGATGATGA GGCTCGCCCC
TCTGTTATCG ATATGAAATG GGGCGGAGGG ACCCGCCGTC GCCAGAGCCT TGCTGCAGGA
ACCCATCTTC AGCTTCTGGT TTATGCATGG CTTGTCTATC AGAAAACCGG ACGCTGGCCT
GCGCTGGCAT ACTTCATTGC ATCACGGGCG GAGCTTCTTG CTGATACTGC CGGTTTTTTT
GTCGCGGGTA ACGCCGTCAG AACCGAAAAC GACGAATCAG CCGCATTGCT CTGGGAGCGG
GTTCTTGCAA GTTTCACATG GCGGATGGAG CAGATCGAGG CCGGCCGTCT TGCCGTTTCA
TGCGATCGCG AAGCAGGGGA TGAGGATGGT TCTCCTCCTG AGGCATTGAA ACCTCTTTTT
GCATCAGCCA TGTACAATCC CTACCGTTTT CTTGTGGGGT GGGGGGAGTG CTTATGA
 
Protein sequence
MIIIFGLHLD SQRSWKKRDA FGHLELGPSG LLSQLEQYLG LSSPPAVKLH RLIHYRSILQ 
RLDNGSRFYS RSMQVDDFGV ASALLDMRDD LYLHGWDGSY RHRPVTKRLS DLAEIERALL
EEEGFEPCNG ERLMSVLEAL KVLRTPITVL RLLEPLDHHP RRWQEVIRLL PFSYSNAFDR
PLAREGSSLA CLQKRLLTDS HSSSDPKDIA DASIRVLTAD TALAAAYYAT ATLSASADDV
LLVHDGKAGL LDDVLAAEHF PQQAFSHSSS SRPALQLLPL ALRLTFRPLD ISALLAFLTL
PAGINPVHPV LRERIVSIVS RYPGIGGEAW VKTLIEFRNE GGEDADSSVK SFLEWVDGAT
QDRHDGMTSG QLIAVTCRVT NFFDEQVRSL SDDLLKEACS AGLEQASDFL SALKTIQQHG
TCWLSIYQIE QLLSKTGEKS SRKSLYVRQA GSVPDASCPG GVCEPSSHVF WWWMAAPLIE
QGGIWSSRER VFLEGEGIVF PSQEQKLLWQ EEEWKRPVLA ARHSLTLLLP PDETKRHPLW
MKIASLFPSI PVMQIEHPQT TGIACTPIVQ RPLVARKPFW SVPGIVLGKK QSFSPTSLEK
LIADPCQWFL EYEAKLSPSK VLDVSDGPRL YGLLFHRMVQ KLCPVLHGGS VTMSSIDAWF
DECFAILVKQ EGAVLLMEGR NADLEGLRLR IRHALHHLVP VLVRQGARSI VAEQRLDGRF
AGGNLYGYID ILLHDDEARP SVIDMKWGGG TRRRQSLAAG THLQLLVYAW LVYQKTGRWP
ALAYFIASRA ELLADTAGFF VAGNAVRTEN DESAALLWER VLASFTWRME QIEAGRLAVS
CDREAGDEDG SPPEALKPLF ASAMYNPYRF LVGWGECL