Gene Paes_1136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1136 
Symbol 
ID6460724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1239835 
End bp1241178 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content46% 
IMG OID642725127 
Productamino acid permease-associated region 
Protein accessionYP_002015812 
Protein GI194333952 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.304278 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAAA ATTCTCACGC AATATCCCTG GTCGAAGCCG TTTCTATGGC TGTAGGCACG 
ATGATCGGAG CCAGTATTTT TTCGATTTTT GGCCTGGGCG CTGAAATAGC AGGCCAAAAC
CTGCCGATGG CTTTTTTTCT TTCCGGTATG CTTGCTTTCA TGGTAGCATA TTCATATGCC
ATCCTCGGCA GACAGATTAT TTCGAATGCC GGTCCGATCT CATTTCTTCT TAAAGGGATC
GGTGACAATG TGTTGACCGG AACATTAGCT GTCTTGATGT GGCTGAGTTA TGTGATTTCA
ATAGCACTTT TTGTCAAGGG CTTTTCCGGA TATCTGCTGC CGTTTATCAA TATAGAATCG
ACTCCGCTTG CAATTGGGCT CACCGAAGCG GGCATTATCA TGTTTTTCAC GTTACTCAAC
ACCTATGGCA GTCAGGCTGT CGGTAAACTT GAGCTCTACA TTGTCGCGGT CAAACTGTCG
ATTCTGCTCA TTTTTATCGT TCTCGGCATG TCATCGATTC ATCTGTCTTC TATCGTTCCA
TCATTGACGC CTAAAGGCAC TGAAGGAATG CTGATGGGCA GTATCGTCTT TTTTCTGTCC
TACATGGGGT TTGGCTTGAT TACCAATGCA TCGGAAAACA TAGACAACCC GTTTGTGAAT
GTGCCGCGAG CTATTTATAT CAGCATTTCG ATCGTCATCA TGGTCTACGT CCTGGTTTCA
GTCGTAGCTC TTGGAAATCT TGCCATTCCG GATCTTGTCA AGGCCCAGGA CAACGCTCTT
GCTGTAGCTG CGCGGCCATT TCTTGGTCAG ACAGGCTTTG CGCTGTTATC TGTTGGCGCA
CTTTTTTCAA TTGCATCAGC ACTCAACGCC ACACTCTACG GCGGAGCGAA TATTGCGTAT
TCTCTGGCGA AAGATGGCGA GTTACCCGGG ATATTCGAGC GAAAAATATG GTTCGGATCC
AGCGAAGGCC TTTACATAAC CGCTGGTCTT GGATTGTTTT TTGCTTTGCT GTTCGATATC
GGAGCAATTG CTTCAATCAC CAGTACTATC TATACGATAA TCTATCTCTG TGTCATGATT
TCTCACTATC GGATCGCCGG TACCTATGGC GGAAGCAGAC CCTTGATCTT CATCTTTTCA
TGCACCATGG CTGTCGTCCT GATTGGACTG ATGAGCTATC AATACATGAC CAGCAAAATC
ACCTTTTTCG CCACTATAGC AACATTTTTC GGCGCTTTGC TGATTGAGTA TCTCTACCGA
TATGGAAGGA AACGCAGGTT TGGCATCATC AATAATCTTT CAGATACGTC TCAAGCCCTA
CATCCCGCAA GGAAAGATAT CTGA
 
Protein sequence
MSKNSHAISL VEAVSMAVGT MIGASIFSIF GLGAEIAGQN LPMAFFLSGM LAFMVAYSYA 
ILGRQIISNA GPISFLLKGI GDNVLTGTLA VLMWLSYVIS IALFVKGFSG YLLPFINIES
TPLAIGLTEA GIIMFFTLLN TYGSQAVGKL ELYIVAVKLS ILLIFIVLGM SSIHLSSIVP
SLTPKGTEGM LMGSIVFFLS YMGFGLITNA SENIDNPFVN VPRAIYISIS IVIMVYVLVS
VVALGNLAIP DLVKAQDNAL AVAARPFLGQ TGFALLSVGA LFSIASALNA TLYGGANIAY
SLAKDGELPG IFERKIWFGS SEGLYITAGL GLFFALLFDI GAIASITSTI YTIIYLCVMI
SHYRIAGTYG GSRPLIFIFS CTMAVVLIGL MSYQYMTSKI TFFATIATFF GALLIEYLYR
YGRKRRFGII NNLSDTSQAL HPARKDI