Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1136 |
Symbol | |
ID | 6460724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 1239835 |
End bp | 1241178 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642725127 |
Product | amino acid permease-associated region |
Protein accession | YP_002015812 |
Protein GI | 194333952 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.304278 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAAAAA ATTCTCACGC AATATCCCTG GTCGAAGCCG TTTCTATGGC TGTAGGCACG ATGATCGGAG CCAGTATTTT TTCGATTTTT GGCCTGGGCG CTGAAATAGC AGGCCAAAAC CTGCCGATGG CTTTTTTTCT TTCCGGTATG CTTGCTTTCA TGGTAGCATA TTCATATGCC ATCCTCGGCA GACAGATTAT TTCGAATGCC GGTCCGATCT CATTTCTTCT TAAAGGGATC GGTGACAATG TGTTGACCGG AACATTAGCT GTCTTGATGT GGCTGAGTTA TGTGATTTCA ATAGCACTTT TTGTCAAGGG CTTTTCCGGA TATCTGCTGC CGTTTATCAA TATAGAATCG ACTCCGCTTG CAATTGGGCT CACCGAAGCG GGCATTATCA TGTTTTTCAC GTTACTCAAC ACCTATGGCA GTCAGGCTGT CGGTAAACTT GAGCTCTACA TTGTCGCGGT CAAACTGTCG ATTCTGCTCA TTTTTATCGT TCTCGGCATG TCATCGATTC ATCTGTCTTC TATCGTTCCA TCATTGACGC CTAAAGGCAC TGAAGGAATG CTGATGGGCA GTATCGTCTT TTTTCTGTCC TACATGGGGT TTGGCTTGAT TACCAATGCA TCGGAAAACA TAGACAACCC GTTTGTGAAT GTGCCGCGAG CTATTTATAT CAGCATTTCG ATCGTCATCA TGGTCTACGT CCTGGTTTCA GTCGTAGCTC TTGGAAATCT TGCCATTCCG GATCTTGTCA AGGCCCAGGA CAACGCTCTT GCTGTAGCTG CGCGGCCATT TCTTGGTCAG ACAGGCTTTG CGCTGTTATC TGTTGGCGCA CTTTTTTCAA TTGCATCAGC ACTCAACGCC ACACTCTACG GCGGAGCGAA TATTGCGTAT TCTCTGGCGA AAGATGGCGA GTTACCCGGG ATATTCGAGC GAAAAATATG GTTCGGATCC AGCGAAGGCC TTTACATAAC CGCTGGTCTT GGATTGTTTT TTGCTTTGCT GTTCGATATC GGAGCAATTG CTTCAATCAC CAGTACTATC TATACGATAA TCTATCTCTG TGTCATGATT TCTCACTATC GGATCGCCGG TACCTATGGC GGAAGCAGAC CCTTGATCTT CATCTTTTCA TGCACCATGG CTGTCGTCCT GATTGGACTG ATGAGCTATC AATACATGAC CAGCAAAATC ACCTTTTTCG CCACTATAGC AACATTTTTC GGCGCTTTGC TGATTGAGTA TCTCTACCGA TATGGAAGGA AACGCAGGTT TGGCATCATC AATAATCTTT CAGATACGTC TCAAGCCCTA CATCCCGCAA GGAAAGATAT CTGA
|
Protein sequence | MSKNSHAISL VEAVSMAVGT MIGASIFSIF GLGAEIAGQN LPMAFFLSGM LAFMVAYSYA ILGRQIISNA GPISFLLKGI GDNVLTGTLA VLMWLSYVIS IALFVKGFSG YLLPFINIES TPLAIGLTEA GIIMFFTLLN TYGSQAVGKL ELYIVAVKLS ILLIFIVLGM SSIHLSSIVP SLTPKGTEGM LMGSIVFFLS YMGFGLITNA SENIDNPFVN VPRAIYISIS IVIMVYVLVS VVALGNLAIP DLVKAQDNAL AVAARPFLGQ TGFALLSVGA LFSIASALNA TLYGGANIAY SLAKDGELPG IFERKIWFGS SEGLYITAGL GLFFALLFDI GAIASITSTI YTIIYLCVMI SHYRIAGTYG GSRPLIFIFS CTMAVVLIGL MSYQYMTSKI TFFATIATFF GALLIEYLYR YGRKRRFGII NNLSDTSQAL HPARKDI
|
| |