Gene Paes_1089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1089 
Symbol 
ID6459763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1198539 
End bp1199738 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content50% 
IMG OID642725086 
ProductATP-grasp domain protein 
Protein accessionYP_002015771 
Protein GI194333911 
COG category[C] Energy production and conversion 
COG ID[COG0045] Succinyl-CoA synthetase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.520899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAA TACTTGAAGG GTCGGCAATG AAGTTTTTCA ACAAGTGGGG CATTCCGGTG 
CCAAACTATG TTGTTGTCAT GGACCCGAAC AGACTGGCTC AGCTGGGCGA GGCCAACAAG
TGGCTTAGAG AATCAAAACT TGTTGTCAAA GCTCATGAGG CCATCGGTGG CAGATTCAAG
CTCGGGCTTG TAAAACTCGG GCTCAACCTC GAAGAAGCTG TCGAAGCATC CAGAGAGATG
ATCGGAAGGA AGATCGGTAC TGCCGAAATC CGCCAGGTTA TTGTGGCCGA AATGCTTGAC
CATGATGAAG AGTACTATGT TTCAATAGCA GGCAATCCTG ATGGAGCGGA GCTTCTGCTT
TCATCCAAAG GCGGCGTTGA TATTGAAGAT AACTGGGATA CCGTCCAGAG AATTCACATT
CCTATCGATG AAACTCCATC GCTTGAAGCG TTGACCGACC TTGCGACAAA AGCCGGGTTC
GGTGATCAGG AGATTGCTGA GCGGGTCGCA AAAATTGCAT CGAGACTTAT TCTTTGTTAT
GATAATGAAG ATGCGCAGTC AATCGAAATC AATCCGCTTG TTATCCGCAA GAGCGATATG
CGTTTCGCTG CCCTTGACGC GGTTATGAAT GTCGACTGGG ACGCACGTTT CCGCCATCCT
GACTGGGATT TCAAACCTGT TTCCGAGATT GGTCGTCCGT TTACAGAAGC TGAGCAGCAG
ATCATGGATA TCGACTCCAG AATCAAAGGT TCTGTGAAGT TTGTCGAGGT TCCGGGTGGC
GAAGTTGCTC TTCTCACCGC TGGCGGCGGC GCTTCGGTGT TCTATGCCGA TGCTGTTGTG
GCTCGTGGAG GTTCGATTGC CAACTACGCT GAATATTCCG GTGCTCCTCC CGACTGGGCA
GTTGAGGCGC TGACCGAAAC CCTTTGCCAG CTCCCCAATA TCAAGCATAT CATTGTTGGC
GGCGCTATTG CTAACTTTAC CGATGTGAAA GCTACGTTTG GCGGTATTAT CAACGGCCTG
CGTGAGAGCA AGGCAAACGG CTATCTTGAT GGAGTCAAAA TCTGGGTTCG CCGTGGCGGC
CCGAATGAAA GCGAAGGTCT TGCCGCTATC AGCAAACTCA AGGATGAAGG TTTTGACATC
CATGTTTACG ATAGAAATAT TCCTATGACC GATATTGTTG ATATGGCTAT GAACGTCTGA
 
Protein sequence
MAKILEGSAM KFFNKWGIPV PNYVVVMDPN RLAQLGEANK WLRESKLVVK AHEAIGGRFK 
LGLVKLGLNL EEAVEASREM IGRKIGTAEI RQVIVAEMLD HDEEYYVSIA GNPDGAELLL
SSKGGVDIED NWDTVQRIHI PIDETPSLEA LTDLATKAGF GDQEIAERVA KIASRLILCY
DNEDAQSIEI NPLVIRKSDM RFAALDAVMN VDWDARFRHP DWDFKPVSEI GRPFTEAEQQ
IMDIDSRIKG SVKFVEVPGG EVALLTAGGG ASVFYADAVV ARGGSIANYA EYSGAPPDWA
VEALTETLCQ LPNIKHIIVG GAIANFTDVK ATFGGIINGL RESKANGYLD GVKIWVRRGG
PNESEGLAAI SKLKDEGFDI HVYDRNIPMT DIVDMAMNV