| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1048 |
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| Symbol | |
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| ID | 6459901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 1153328 |
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| End bp | 1154074 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642725048 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002015734 |
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| Protein GI | 194333874 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.201742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000163271 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAACTTT CAGGAAAAGT GGCCCTGATT ACCGGGGCAT CAGGAGGAAT CGGCAGCGCT
TCAGCGCGGT GTTTTGCCCG AGAGGGAGCG TCGGTTATTC TTAGTGACAG GACGGTTGAG
AGCTGCTTCG AGTTGGAGAA AAGTATTCGT GAAGAGGGGG GGGAGGTACG TGTCATTTCG
GCTGATGTTA CCCGTGAGGC TGAAATCAAA GAAATGTTTG CAGGGCTTGA TCGTCTTGAT
ATTCTGCTTA CTCTGGCAGG AGGCGATCAC GAGCCTGTCA GCGATATCGA GATGATGGAC
TGTGAGAAAA TGAGTATGAA TCTGGATCTC AATCTGAAAT CATGCATGCT CTGCTGCAGG
GAAGCCGCCA GGCTCATGAA GTCGCAGCGA TACGGTCGCA TCGTTACCAT GAGTTCGCTG
GTGTATCGGG GTAGCCCAGG GCAGTTTTCA TATGCCGCGG CAAAGGGCGG GATTTTTTCA
TTTACCCGTT CTCTGGCCAT GGCTCTTGGT TCATGGGATA TTACGGTCAA TGCGCTTGCA
CCGGCTCTTG TCGATGTACC ACTTTTCGAG CGGGTTCTGG GTCCAGAGCG ATGGAAGGCC
ATGGCGGAAG CTGCTGCAGC TCGATACCCT CTGCGTCGGA TTGCTACGGC CGAAGATGTT
GCCAGAGCTG CGCTGTTTTT TGCTTCTGAC GATGCTGCGT TTATAACGGG ACAGATTCTT
GAGATATCGG GCGGCGCACG ACTCTGA
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| Protein sequence | MQLSGKVALI TGASGGIGSA SARCFAREGA SVILSDRTVE SCFELEKSIR EEGGEVRVIS
ADVTREAEIK EMFAGLDRLD ILLTLAGGDH EPVSDIEMMD CEKMSMNLDL NLKSCMLCCR
EAARLMKSQR YGRIVTMSSL VYRGSPGQFS YAAAKGGIFS FTRSLAMALG SWDITVNALA
PALVDVPLFE RVLGPERWKA MAEAAAARYP LRRIATAEDV ARAALFFASD DAAFITGQIL
EISGGARL
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