Gene Paes_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1000 
Symbol 
ID6458964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1103380 
End bp1104099 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content48% 
IMG OID642724999 
Producthypothetical protein 
Protein accessionYP_002015686 
Protein GI194333826 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.621877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.495973 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGA ATGGTATGAA TGATATTGAA CCGAATCCTG TTGTGATTAT TCCGGGGGTG 
CTGTTTTGGG ACGGCTTGTA CGACGGGATG AAACAGGAGC TCAGTCGCAC TATTGCATCG
GAAAGAATCG CCGTGGTTCC TGTCAGTCTG CTTGACTGGG TAGGCTTTCC GCCAAGGCCT
GAGCTTTCCA CGAACAGAGT CATGGCCGCA CTTGACAGGA CAATAGCGGA CATGCAGCAG
CGTTTTCCTG ATAAACCGGT GAGGATTGTC GCTCATAGCG GAGGAGGGAC AGTAGCGTTG
GTCTATCTTC TGGAAAAAGA GTTTCAGGGT GATGTGTACC ATCGCAGAAA ATCGGTCAGT
ACACTGTTGA CCCTTGGTAC TCCTTTTGTG ACAAAAGAGT ATTACGCAAA GATGAAGACC
GATTTCATCA TGAAGCATCT TTCCGACGAC TTTTTTCATG ATTGCCGTGT TGTTTCAGTT
GTGAGTGATG CCTACCAGGG AGCTCTCGAT AAAGGCCTGA TCGAAAAGGT GTGCTACCAT
TTCTATATGA ATGTTGTCGG AGAAGGAAAT CTGGCCGGCG ACGGCATTGT TCCTGTTACA
AGCTGTTTTC TTGAAGGGGC TGAAAATGTT ACTATTTCAG GAATTGAGCA TCTTCCAACA
CCGCATGCCA AATGGTATGG GACAAAAGAG GGGGTCGAAC AATGGGTGGA CATGCTATGA
 
Protein sequence
MSENGMNDIE PNPVVIIPGV LFWDGLYDGM KQELSRTIAS ERIAVVPVSL LDWVGFPPRP 
ELSTNRVMAA LDRTIADMQQ RFPDKPVRIV AHSGGGTVAL VYLLEKEFQG DVYHRRKSVS
TLLTLGTPFV TKEYYAKMKT DFIMKHLSDD FFHDCRVVSV VSDAYQGALD KGLIEKVCYH
FYMNVVGEGN LAGDGIVPVT SCFLEGAENV TISGIEHLPT PHAKWYGTKE GVEQWVDML