Gene Paes_0970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0970 
Symbol 
ID6458774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1068406 
End bp1069338 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content54% 
IMG OID642724972 
ProductHpcH/HpaI aldolase 
Protein accessionYP_002015659 
Protein GI194333799 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0326434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTCA AAGACATTAC CTGGCTGGAC AGTGCCAGTA TTGAAGCGAT CAAACAGCAG 
TTGCCTGAAA CTGTTTCCCG GCGTCCCCTG ACTCGCGGTC TGCGCCGAAG CGCCCTTATG
GTTTCGGCCC ATCGGCTCAA CCATCTGAAC AAACTGGATG TACTGGCAGC TGATATGGCT
GTCATCAATT TGGAGGATGG CGTTGCGCCG CAAGAGAAGC CCCGCGCTCG TGCTCTGGCC
GCGCTGTTTA CCGCCCATGC CCGAGAGGCG AAAACAGAAC TGATTGTACG GGTCAATCCC
CTGGGTGAAG GGGGAGAAGA AGATATCCGT TTGATCAACC GGGCAGTGCC GGACTCAATC
CGTATTCCAA AGGTTAGAAC CGCTCAGGAA GTCGAACAGG CTTGTCGCCT GGTAGATCCT
GCGATTCGAA TCCATCTCTC TATCGAGACC GGTGAGGCGC TGAAGAAACT TGCCGATCTG
AGGGTTGAGG AGCGGGTGGA TACGGTCTAT CTGGGTATTC TGGATTTATG TGCCGATCTC
GGATTGCCCC AGTCAGTGAT CACGCCGGGG AATCCAACGG CCAGCTATCT GCTTTCACGT
TTTCTGGTGG ATGCCCTCAC AGCCGGCTTT CATCCGGTAT CGTTTGTCCA TCAGGAGTAC
AAGGATCTGA ATACCTTCGA AAAATGGTGC CTCCTGGAAC GGAGCATGGG ATTTTCATCC
AAAGGCTGTA TCTCGCCGGG TCAGGTGGAG CTGGCCAACC GGGTTTTCGC CCCCAAGCTA
GAGGAGCGCG TGCGAGCAAT AATCATTGTG CGCTGTTTTG AGGAGGAGGC AAAAAAAGGC
AATACCGGCT TTGTGCATGA GCAGTACGGG TTTATCGATG AGCCTGTTTA CAGAGGAGCA
TTGGCTGTCC TTGCAGCAAC CGATCAGGAG TAG
 
Protein sequence
MIFKDITWLD SASIEAIKQQ LPETVSRRPL TRGLRRSALM VSAHRLNHLN KLDVLAADMA 
VINLEDGVAP QEKPRARALA ALFTAHAREA KTELIVRVNP LGEGGEEDIR LINRAVPDSI
RIPKVRTAQE VEQACRLVDP AIRIHLSIET GEALKKLADL RVEERVDTVY LGILDLCADL
GLPQSVITPG NPTASYLLSR FLVDALTAGF HPVSFVHQEY KDLNTFEKWC LLERSMGFSS
KGCISPGQVE LANRVFAPKL EERVRAIIIV RCFEEEAKKG NTGFVHEQYG FIDEPVYRGA
LAVLAATDQE