Gene Paes_0912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0912 
Symbol 
ID6460416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1001248 
End bp1002123 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content52% 
IMG OID642724915 
Productprotein of unknown function DUF125 transmembrane 
Protein accessionYP_002015602 
Protein GI194333742 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGGAT TCAAGGGGAT CACTGCGGCC GATGTGCTGG GTTTTCAGAA AAATGAGCTG 
ACAGAGCATT ATATATACAA GACCCTTGCC GGCCGTACCA CGGGCATCAG GAATCGTCGT
ATTCTTTCCC AGATTGCCGA TGATGAACTT CGTCATTACA ATGTCTGGAA GTCCTATACC
CGCCAGGATG TCGAACCGGG CAGGATGAGG ATCTGGTTCT ACACCATGAT CAGCTCGTTA
CTTGGGCTGA CCTTTGGACT CAAGCTGATG GAGAAGGCTG AAAAGTATGC CTATAGCGCT
TATAAGGAGC TCCCTGAGTC TTTTCATGAG GCCCGGGCAA TAGTAGAGGA CGAGGAGGAG
CACGAGCAGG CATTGCTCGG GATGCTCGAT GAAGAGCGGC TTCGCTATAC CGGGTCGATC
GTTCTCGGCC TCAATGATGC TCTTGTCGAG CTGATGGGGG TTCTGGCGGG ATTGACCTTT
GCCTTTCAAA ACAGTCGCTT TGTTGCCCTG ACCGGTGTTC TTACGGGTTT TGCTGCCGCG
CTGTCAATGG CTGCCTCTGA ATATCTGTCC ACAAAGGCAG AGGCGGGCAC AAAAAGCCCG
CTGAGAGCTG CCTTGTATAC CGGACTTGCC TACATTCTGA CGGTTATTGT CATGATTTCA
CCCTTTCTTC TGGTTCCGTC GCTCTCTATC GCCCTTGCTC TGGCCTTTGG CGGTGCGGTA
TGTATTATCG CGCTTTTTAA CCTCTATGTA TCGGTTGCTC AGGACGTCAG TTTCAAAACG
AGGTTTTTCG AAATGGTCGG CTTGAGTTTC GGGGTCGCAT TGCTGAGTTT TCTGGCGGGG
ATGGCAGCTC GAGCTGTTTT TGGCATTGAG GTATGA
 
Protein sequence
MKGFKGITAA DVLGFQKNEL TEHYIYKTLA GRTTGIRNRR ILSQIADDEL RHYNVWKSYT 
RQDVEPGRMR IWFYTMISSL LGLTFGLKLM EKAEKYAYSA YKELPESFHE ARAIVEDEEE
HEQALLGMLD EERLRYTGSI VLGLNDALVE LMGVLAGLTF AFQNSRFVAL TGVLTGFAAA
LSMAASEYLS TKAEAGTKSP LRAALYTGLA YILTVIVMIS PFLLVPSLSI ALALAFGGAV
CIIALFNLYV SVAQDVSFKT RFFEMVGLSF GVALLSFLAG MAARAVFGIE V