7 homologs were found in PanDaTox collection
for query gene Paes_0754 on replicon NC_011059
Organism: Prosthecochloris aestuarii DSM 271



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011059  Paes_0754  photosystem P840 reaction center protein PscD  100 
 
 
127 aa  263  5e-70  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.00000200492  normal  0.153168 
 
 
-
 
NC_010831  Cphamn1_1708  hypothetical protein  70.87 
 
 
161 aa  202  1e-51  Chlorobium phaeobacteroides BS1  Bacteria  hitchhiker  0.000233286  decreased coverage  0.0000638184 
 
 
-
 
NC_010803  Clim_0758  photosystem P840 reaction center protein PscD  61.6 
 
 
144 aa  175  2e-43  Chlorobium limicola DSM 245  Bacteria  normal  0.930315  n/a   
 
 
-
 
NC_007514  Cag_1894  photosystem P840 reaction center protein PscD  60 
 
 
144 aa  173  6e-43  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.684879  n/a   
 
 
-
 
NC_008639  Cpha266_0863  photosystem P840 reaction center protein PscD  59.52 
 
 
144 aa  172  9.999999999999999e-43  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.452433  n/a   
 
 
-
 
NC_007512  Plut_0620  photosystem P840 reaction center protein PscD  59.2 
 
 
144 aa  168  2e-41  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_2157  photosystem P840 reaction center protein PscD  58.4 
 
 
144 aa  152  1e-36  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.985917  n/a   
 
 
-
 
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