Gene Paes_0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0540 
Symbol 
ID6458491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp583266 
End bp583919 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content50% 
IMG OID642724539 
Productphosphatidylserine decarboxylase 
Protein accessionYP_002015243 
Protein GI194333383 
COG category[I] Lipid transport and metabolism 
COG ID[COG0688] Phosphatidylserine decarboxylase 
TIGRFAM ID[TIGR00164] phosphatidylserine decarboxylase precursor-related protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGCAC GATACGGCCG GACAACCCTG ACAAAAACAC TTCTTCTCTG CCTGGCAGCC 
TTTTTCTGCG CGCTCCTGCT GCCAACACTC GTCCAGATCC CCGTCATGAC CCTTTCGCTC
CTGATGGTGC TCTTCAGCCT CTATTTCTTC AGAGACCCGT CAAGAACTCC TGTCGGCAAC
GCATCGGCAA TAGTGGCTCC TGCAGACGGA AAAGTGCTCC TTATCAGAAA AACGGACCAC
CCGTTTACCG GAAAAAATTC CACCCTGGTC AGCATCTTCA TGTCCCCGTT CAATGTCCAT
GTCAACAGAA TCCCCATCAA CGGAAGGGTA ACCCATCTGG AGTATCATCC AGGCAAATTC
CTCATGGCAT TTGATCACAA CAGCATGAGC GATAACGAAC GCATGGATAT CGGCATTGAA
AACACTCAAT CCAAAGTATT CTTCTCCCAG GTATCTGGGT TTCTTGCCCG AAGGATCGTC
TGTCATCTGA CCAACGACCA GAACGTCAGG GCAGGTGAAA AGTTCGGCAT GATCAAATTC
GGCTCCCGAC TCGACATCAT CCTCCCCTCT CAGGCAGAAA TTGCGCTTGA AGAAGGAAAA
AAAACTCGCG CAGGAGAAAC CGTTGTTGCC CGGCTTCCCA ATATAACTAC ATAG
 
Protein sequence
MFARYGRTTL TKTLLLCLAA FFCALLLPTL VQIPVMTLSL LMVLFSLYFF RDPSRTPVGN 
ASAIVAPADG KVLLIRKTDH PFTGKNSTLV SIFMSPFNVH VNRIPINGRV THLEYHPGKF
LMAFDHNSMS DNERMDIGIE NTQSKVFFSQ VSGFLARRIV CHLTNDQNVR AGEKFGMIKF
GSRLDIILPS QAEIALEEGK KTRAGETVVA RLPNITT