| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0394 |
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| Symbol | |
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| ID | 6460496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 428387 |
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| End bp | 429526 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642724394 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_002015098 |
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| Protein GI | 194333238 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0331945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00125692 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCATGA ACGATCATTC CCGTCGCAGC TTTCTGAAAC GCTCACTTCA GGCCGGGGCA
GCCTCGCTTG CTCTTGGAAC ACCGTTTCTT GCCGCAGGAT GCGCCACGCC ATCCTCTTCC
CCCTCCGATG CACCGGCTGT CCATACCAGA AAAAAGTTTC AATGGAAATT ACTGACAACC
TGGCCCCCCT CGTTCCCGGT CATACAGGAC GGGCCGAAAC TGCTTGCCAA ATGGGTAAAC
GAGATGAGCA ACGGCCAGCT TGACATCCAG GTCTACGGAG GGGGAGAACT TGTTCCTTCT
CTTGAAGCAT TCGATGCGGT CAGTCAGGGC ACAGCAGAGA TGGGCCATGG GGCATCCTAT
TACTGGGCAG GAAAAGTACC CGCCGCACAG TTTTTTTCGG CTGTCCCGTT CGGTATGAAC
CCGCAGCAGA TGAATTCGTG GCTGCAAAGC GGAGGGGGAA TGGAGCTCTG GGAAAAGGTC
TATGCTCCGT TTAATCTCAT CCCTCTTCAG GGTGGCAATA CGGCAATTCA GATGGGTGGC
TGGTTTAACA AGCAAATCAA CAGCGCTGCC GATCTCAAGG GTCTGAAAAT GCGTATCCCG
GGACTTGGCG GCAAGGTCAT ATCCAAAGCT GGCGGTTCTG CAATCCTGTC CGCCGGAGGA
GAAATCTACA CGAACCTCGA ACGTGGCGTT ATCGATGCAA CAGAATGGAT AGGACCCTAT
CATGACTATA TGATGGGATT CTACAAAGTA GCCCGATACT ATTACTATCC GGGATGGCAT
GAGCCAGGAA CGAACCTCGA ATTTTTCATC AATACCAATG CGTTCCAACA ACTGCCTTCA
GACCTGCAGC TCATCGTTCG CACGGCTGCA GCAAAAGTCA ATCACTGGAT GCTGTCAGAA
TTCGAATCAA AAAATAACAT CTACCTTCAG AAACTCGTTA CGGAGGAAAA GGTTGACTTG
AGACCCTTCC CTTCAGAGGT AATTGAACAG CTGAGACGCT ATTCCAGCGA GGTGATCGAC
GAGCTTGTCC TCAATGATAG CCAAAGCCGT GATGTCTATC AGGCATACAA CAGCTTCCGC
AGCAGCATTG CTCCGTGGAA TGAAATTTCG GAAAAGATCT ACTACACAGA GAACTTGTGA
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| Protein sequence | MFMNDHSRRS FLKRSLQAGA ASLALGTPFL AAGCATPSSS PSDAPAVHTR KKFQWKLLTT
WPPSFPVIQD GPKLLAKWVN EMSNGQLDIQ VYGGGELVPS LEAFDAVSQG TAEMGHGASY
YWAGKVPAAQ FFSAVPFGMN PQQMNSWLQS GGGMELWEKV YAPFNLIPLQ GGNTAIQMGG
WFNKQINSAA DLKGLKMRIP GLGGKVISKA GGSAILSAGG EIYTNLERGV IDATEWIGPY
HDYMMGFYKV ARYYYYPGWH EPGTNLEFFI NTNAFQQLPS DLQLIVRTAA AKVNHWMLSE
FESKNNIYLQ KLVTEEKVDL RPFPSEVIEQ LRRYSSEVID ELVLNDSQSR DVYQAYNSFR
SSIAPWNEIS EKIYYTENL
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