Gene Paes_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0340 
Symbol 
ID6460456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp370540 
End bp371778 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content53% 
IMG OID642724338 
Productphosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase 
Protein accessionYP_002015044 
Protein GI194333184 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase 
TIGRFAM ID[TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.83351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACTGA ACGGAAAAAA CATTCTTCTC GGGATCTGCG GAGGTATTGC CGCATATAAA 
ATGCCAATGC TCATCCGATT ACTGAAAAAA GAGGGCGCTC ATGTCCGGGT AGTCATGACC
GGCTCAGCCA CCCGTTTTGT CACTGAGCTG ACCCTGGCGA CGGTCTCACA GGAGCCAGTC
AACCGGGATA TCTTCCCGGA ATCATACGAC ACTGCACATG ACTGGACCCG TCATATCTCT
CTTGGAGAGT GGGCAGATAT GATGATCATC TCGCCAGCGA CCGCCAATAC GATTGCAAAA
ATCACGGCCG GGCTCTGCGA TGATCTTCTC TCGACCTGCT TTATCACGCT GCGCCCCGAC
AGACCGAAAC TTATCTTCCC TGCCATGGAT GGGGAGATGT ACCGCTCCGA CTCGGTACAG
CGGAATCTGG CATGGCTCAA AAGTAACGGA TGCAGGGTAG TCGAGCCTGA AAGCGGCTCG
CTGGCTTCAG GCCAATGCGG TACAGGAAGA ATGCCGGAAC CTGAAACCAT CCTGGAATCT
ATCATCGAAT CCTTAGGCGA AAAACGGCAG TCCAGCCGCC TTCAAGACAA AAACATCATC
GTCACAGCCG GGCCGACAAG AGAAAAAATC GACGGAGTAC GCTTTCTTTC CAACTACTCC
TCCGGTAAAA TGGGCTTTGC TATAGCATGC GCAGCAGCTC GAAGAGGAGC CGACGTAACG
CTCATCACTG GCCCTGTCAG CCTTCCTACT CCCGAAGGGG TCCGCAGAAT CGATATAGAA
ACCGCCTGCG ACATGCAGCG GGAGGTTCAG CGCATCGCTT CCGGATGTGA TATCTTTATT
GGTGCCGCTG CCGTTGCCGA TTACCGGCCC GCTGAAACCG TCACCGGAAA AATCAAGAAA
ACCAGTGAAA CCATAGCATT GTCACTGATA CGAAACCCTG ATATTCTCGC CGGTTTTTCA
GCGGAGAAAA AAACACATCA GCTCGCCGTC GGCTTCTCGC TTGAAACAGA GAACGGACTC
GGATACGCAG CAGAAAAGCT CCGTGCAAAG AACCTCGATC TGATCGCCTA TAATACCTAT
GACGGAGAAA CATCAGGTTT TGAAGTCGAC ACCAATGCGC TGACACTCAT CGATAGACAG
GGCACGACAA CCGAACTGCC GCTACTGACA AAAAGAGACG CAGCAATCCG GCTACTCGAT
GCCATTGAAT CACTGCTGAG CAGACCGGAC AACGGCTGA
 
Protein sequence
MILNGKNILL GICGGIAAYK MPMLIRLLKK EGAHVRVVMT GSATRFVTEL TLATVSQEPV 
NRDIFPESYD TAHDWTRHIS LGEWADMMII SPATANTIAK ITAGLCDDLL STCFITLRPD
RPKLIFPAMD GEMYRSDSVQ RNLAWLKSNG CRVVEPESGS LASGQCGTGR MPEPETILES
IIESLGEKRQ SSRLQDKNII VTAGPTREKI DGVRFLSNYS SGKMGFAIAC AAARRGADVT
LITGPVSLPT PEGVRRIDIE TACDMQREVQ RIASGCDIFI GAAAVADYRP AETVTGKIKK
TSETIALSLI RNPDILAGFS AEKKTHQLAV GFSLETENGL GYAAEKLRAK NLDLIAYNTY
DGETSGFEVD TNALTLIDRQ GTTTELPLLT KRDAAIRLLD AIESLLSRPD NG