Gene Paes_0292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0292 
Symbol 
ID6458723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp312293 
End bp312859 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content49% 
IMG OID642724288 
Productelongation factor P 
Protein accessionYP_002014996 
Protein GI194333136 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 
TIGRFAM ID[TIGR00038] translation elongation factor P 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.443832 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0255427 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCTA TCAGTAACAT TTCCAAAGGC TCGATCATCC GCTTCAGAAA TGAGCCTCAT 
ATTATCGAAA GTCTTGTACA TCGAACCCCG GGGAATCTCC GGGCATTCTA TCAGGCCGGA
ATGAAAAACC TCAAGACAGG GCGTAATGTC GAGTATCGGT TCAGTGCCAA CGAATCGGTA
GATCTTATCG TCACCGAACG AAAACAGTAT CAGTACCTCT ATCGCGACGC AGAGGATTTC
GTCATGATGG ATACCTCAAC ATTCGATCAG ATCAATGTCG CTGCGGAAAT CATCGGACTA
CCGGCCCGCT TTCTCAAAGA AGGTGATCTG GTAGACATCG TCTTTGCCGA CGACGGATCG
ATTCTTGAAG CAGAGCTCCC GACGTTTGTC GAACTCGAAG TCACGGAAAC CAATCCGGCC
ACCAAGGACG ACAGGGCCAC AAGCGGCTCA AAACCAGCAA TACTGGAAAC CGGAGCAGAG
GTCAACGTAC CGATGTTTAT CCAGACTGAA AGTATTATCC GTGTCGATAC CCGCACCGGA
GAATATATGG AAAGAGTCAA AAAGTAA
 
Protein sequence
MTSISNISKG SIIRFRNEPH IIESLVHRTP GNLRAFYQAG MKNLKTGRNV EYRFSANESV 
DLIVTERKQY QYLYRDAEDF VMMDTSTFDQ INVAAEIIGL PARFLKEGDL VDIVFADDGS
ILEAELPTFV ELEVTETNPA TKDDRATSGS KPAILETGAE VNVPMFIQTE SIIRVDTRTG
EYMERVKK