Gene Paes_0271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0271 
Symbol 
ID6460770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp283666 
End bp284403 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content50% 
IMG OID642724263 
ProductABC-2 type transporter 
Protein accessionYP_002014975 
Protein GI194333115 
COG category[S] Function unknown 
COG ID[COG1511] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0843829 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000145713 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGCGTT TAACCGCTTT CCTGAGTATC CTTTCGAAGG ATATGCGGGC GTATTACCTG 
AAGCCGCCGA ATATCAGCTG GGGAATACTG TTTCCGCTGG TCTGGACGGG AATGTTTTTT
GTGAGGTCCG GCCATAGCGG CGAGGACCTT ATCGGCGTAC TGCCGGGAAT GGTAGCGATT
TCCATCCTGT TCGGTACGAC CTCCATGCTT GCCGTGACTG TGACCTTTGA ACGCAAGGCA
AAGGCTTTTG AACGCCTGCT TCTTGCTCCG ATTCCTCTTG AGCTCCTGAT GCTGGCCAAG
ACAGGAGGCG CTATTCTTTT CGGGGTTGTC AATGCGTTGG TTCCGTTCTG TATCGCATTT
TTTCTGGTCG ATCTTTCCGG CGTAGAGTGG GCGATCGTTT TCCCTGCAGT TGTGATGATC
GCTGTGGTGT CAGCGTTTCT TGGCCTGTTT ATCGCGGTGT CGGTCAGCGA GGTTTTTGAG
GCGCAGACGT TTTCCAACTT TTTCCGTTTT CCCATGATTT TTCTTTGCGG CCTGTTTTTC
CCTGTCACTT CATTGCCACA CTATCTTCAG CCTTTTTCAT GGATGCTGCC GCTGACCTAT
GGTGCTGATC TTCTTCAGGG GGCTATAGCT GGAAAAAACA TGCTCTCTTT CCCGATTGAT
TTTCTGGCGA TCGTGCTTTT TGCTCTTCTG CTTTTTTTTC TGAGCCTTAT GAGCGTTCAC
CGGAAATGGA TCTACTGA
 
Protein sequence
MKRLTAFLSI LSKDMRAYYL KPPNISWGIL FPLVWTGMFF VRSGHSGEDL IGVLPGMVAI 
SILFGTTSML AVTVTFERKA KAFERLLLAP IPLELLMLAK TGGAILFGVV NALVPFCIAF
FLVDLSGVEW AIVFPAVVMI AVVSAFLGLF IAVSVSEVFE AQTFSNFFRF PMIFLCGLFF
PVTSLPHYLQ PFSWMLPLTY GADLLQGAIA GKNMLSFPID FLAIVLFALL LFFLSLMSVH
RKWIY