Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0006 |
Symbol | |
ID | 6458649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 5789 |
End bp | 8191 |
Gene Length | 2403 bp |
Protein Length | 800 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642723998 |
Product | DNA polymerase B region |
Protein accession | YP_002014719 |
Protein GI | 194332859 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0104933 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTCAA CCATCCTCGA TACAATACAA CATAACCCCC TGCTCTTCGG AAAAGACACG GAAGAATGCA TTGTGGGAGC CCATCAGCAA TCAGACAGCA CCGTAAGAAT CTACACAAGA AAGGGTTTAT CGACAGAAAG CAGGGATGAA GCATTTTACC CATACTTCTT TCTCTCAGAC GGTGCCCTGC TCAGCGAGTT CACACCGCCA GAGAATGAAA AGTTCTGGCT CATCAAACTT CAGGGCAGCA ATTACTACCG ATATCTTGCG ATTTTCAGAA GTTGGAGCAA CTACCGGGCA GCAGTTGAGC ATATTCAATC GAAGAGTGCA AGAGCAAACG ATACTGATGA AATCCCGGCA CCATCCGTTG CTCAAAAAAC ACACTTACTG TATAACAAAG GGGATGCCGT TACCCAATTC CTTATGCAGA CAGGCAAAAC GATGTTCAAG GGAATGGTAT TTGAAGATCT CTACCGGATG CAGCTTGATA TTGAAACCTA TTTCAAACCG GAATCAGGAA AGAGCTCAAA AGTGGAGATC GGTAAAGATC AGGTCATTAT TGTCTCTCTC AGCGACAACC GCGGATGGGA AAAAGTCATC CATGCGCACG GCAGGACAGA AAAAGAACTG CTCATAGAGC TCATTGCAAT CATCCGTGAG AAGGATCCTG ATGTGATTGA AGGGCACAAT ATTTTCCGTT TTGATCTGCC ATACCTGCAT CGCAGATGTG AAATCAATGG AATTGAGTTC AGGATAGGAC GTGATCAATC AATTCCAAGA AACTATCCGG CAAGCATACG ATTCGCAGAA CGATCAATCG ATTACACATT CTACGATATT GCCGGGCGTC ATGTCATCGA CACATGGTTT CTCGTACAGA GCTTTGATGT ATCGAAACGG GCTATGCCGG GATATGGTTT AAAAGCTGCA GCAAAATTCT TTGGGGTTGC ACGTGAAAAC AGGGTCTATG TCGATTACGC GGATATGGCT GATCTCTGGG AGAACAACCC TGAAAAGCTT CTGGAATATG CACTGGACGA TGTCAGGGAA ACACGAGAGA TCGCATCGAT GCTTTCAGGC AGCAACTACT ACATGACAAA GATGATGCCT TATGGCTATG CACAATGTTC CCGATTGGGA CCTGCTGCCA AAATTGAAGC GTTACTTGTA AGAGAGTACC TGAAAGAAAA ACACTCGCTT CCACGACCGG AAAACGGTCA ACAGCATTCA GGAGGATATA CTGAGGTCTT TCTTCAAGGC ATTCTCGGAC CCATCGTCTA TGCCGATGTT GAATCGCTCT ATCCGTCCAT CATGCTTTCG TACAAAATCT GCCCAAAAAG TGATGAACGC AAAATATTCC CCCAGATCCT TACGAATCTC AAAGATCTGC GATTTGCAGC TAAAAAGAAG GCGAAAGAAG AAAGAAAACA GGACAACATC CAGGTTGCTG ACAACTTCGA GGCGATGCAA GCATCCTTTA AAATCGTGAT CAATGCGATG TATGGCTATC TGGGATTCAG CGCGGGAATT TTCAATGACT ACGAAGAAGC TGACAGAGTC ACCACAACAG GCCAGGATAT AGCAAGGCAG ATGATACGTG AGTTTGAATC AAGAGGATCA AGAGTTATTG AAGTCGATAC CGATGGTATT CTCTTTATGC CACCGTCGCA TATTCAATCT TCTGAAGAGG AAATAAGCCT GGTCAATGAA GTCTCTTCGG TCATGCCGGA AGGCATCAAT ATTGGATATG ATGGAAGGTA CAGGAAAATG ATATCGTACC TGAAAAAAAA CTACGCACTC CTGCACTATG ATGGAACCAT GCAACTGAAA GGATCATCGC TTGTCAGCAG GAGTGGAGAA AAATTCGGAC GTGAATTTAT CAGAGATGGA TTCCGCCAGT TGCTTGAGGA AGATATTCAG GGGCTTCATG ATCTCTATGT GACATGGAAA GAGAGAATTA TTCATCACGA CTGGAATGTT CTGGATTTTG CGAAAACAGA ATCCATGAAA AGTTCAATAG ATCAATACCG TGCTGATGTT GAATCGGGAA AACGCTCCAG AACAATAACC TATGAACTTG CCATCAGAAA AGGTATCGAC GTCAATAAAG GAGACCGCAT CACCTACTAT GTCTCCGGAA GCGGCATGCA GAGCAATCAT TATGAGAAAG GAAAAATAGC GGAGGAATGG GATAAGAACA CCCCTGACGA AAACACGCAG TTTTATCTGA AAAGGCTTGA TGAATTTGCA CAGAAATTTA TCCCGTTTTT CAAACCACAG GATTTCAGTG CAATTTTTTC ATCGGATACC CTTTTTTCGT TTTCACCAGA GGGAATAGAA ATTATCCGCG AAATTCGTAA CAAAGAGGCA AATTCACAGC ATGAAGAAGA GATTTCCTTC TAA
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Protein sequence | MTSTILDTIQ HNPLLFGKDT EECIVGAHQQ SDSTVRIYTR KGLSTESRDE AFYPYFFLSD GALLSEFTPP ENEKFWLIKL QGSNYYRYLA IFRSWSNYRA AVEHIQSKSA RANDTDEIPA PSVAQKTHLL YNKGDAVTQF LMQTGKTMFK GMVFEDLYRM QLDIETYFKP ESGKSSKVEI GKDQVIIVSL SDNRGWEKVI HAHGRTEKEL LIELIAIIRE KDPDVIEGHN IFRFDLPYLH RRCEINGIEF RIGRDQSIPR NYPASIRFAE RSIDYTFYDI AGRHVIDTWF LVQSFDVSKR AMPGYGLKAA AKFFGVAREN RVYVDYADMA DLWENNPEKL LEYALDDVRE TREIASMLSG SNYYMTKMMP YGYAQCSRLG PAAKIEALLV REYLKEKHSL PRPENGQQHS GGYTEVFLQG ILGPIVYADV ESLYPSIMLS YKICPKSDER KIFPQILTNL KDLRFAAKKK AKEERKQDNI QVADNFEAMQ ASFKIVINAM YGYLGFSAGI FNDYEEADRV TTTGQDIARQ MIREFESRGS RVIEVDTDGI LFMPPSHIQS SEEEISLVNE VSSVMPEGIN IGYDGRYRKM ISYLKKNYAL LHYDGTMQLK GSSLVSRSGE KFGREFIRDG FRQLLEEDIQ GLHDLYVTWK ERIIHHDWNV LDFAKTESMK SSIDQYRADV ESGKRSRTIT YELAIRKGID VNKGDRITYY VSGSGMQSNH YEKGKIAEEW DKNTPDENTQ FYLKRLDEFA QKFIPFFKPQ DFSAIFSSDT LFSFSPEGIE IIREIRNKEA NSQHEEEISF
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