Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_06166 |
Symbol | |
ID | 6306266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 2819019 |
End bp | 2820344 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642640027 |
Product | flagellar protein |
Protein accession | YP_001913886 |
Protein GI | 188576957 |
COG category | [N] Cell motility |
COG ID | [COG1345] Flagellar capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.332018 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATCGG TGATCAGCAC TTCCGCCTCC GGATTGGATA TCCCTACCGT GGTGTCTACC CTGGTGTCCC GGCAGAGAGA CCCCGAGCAG GCACGCATCA ACAAGGCCGG CACCGCCGCG ACGACGCAGT TGTCGGCAAT CAGCCAGATC AAGAGCAGCA TGACCACGCT CAAGTCTGCG CTGGACAAAG TGGTCAGCAG CGCCGACACC AACGCCTACA AGGCCACGGT GCCGACCGAT GCCGGCTTCA CCGCCACCAC CACCAGCTCG GCGGCGCCAG GCAACTATTC GGTTGAAGTG GTGTCGCTGG CGAGCTCGCA AAAACTGGCC TCCGGCGCGT TTAAGGCCGA TGCCACGGTG GGTAGCGGCA CGCTGACGAT CGGCTACGGC GACAACAGCG TCACCGTGGA TATCAGCGGC ACCGACAAGC TCACCGACAT CGCGGCGGCC ATCAACAAGG CCGCCGGCGG CAAGGGCGTC ACTGCCAGCG TTGTGACCGC CAACGATGGC CAGCATCTGG TCTTCAATGC GGTCGATTCC GGCACCAAGG GCGCCCTGAC CATCAGTGCC AGCGACCCGA GCCTGAGCAG CCTCACCTAC GGCCCCGGCG TCACCGGCGG GCTGAACCAG ACCGTGGCAG CCGCCGACGC ACGGGTGCGC GTGGACGGCT TCGAGCGCAC CTCCAGCTCC GACACCATCA GCGACATCGT GCCCGGGGTG GTGCTCAACC TCACCAAGGC CGCTGAAGGC ACCAAGTTCA ATCTTGGCGT GGCAGCCGAC ACCAGCGGGC TCAAGGGTAA CCTCACCGCC TTCGCTGCGG CCTACAACAC CGCCAACACC TTGCTGGCGA AAAGCAGCAG TTACGACGCC ACCACCAAGA CCGCCTCGGC GCTGACCGGC GATTCGCTGG TGCGCAGCCT GCAACAACAG CTGCGCGGCC AGGTCAGCGG CAGCGTCACC GAACTCAAGG CCCTCGGCCT GACCATCGAC AAGGATGGCG TGATGAGTTT CGATGGCAGC AAGTTCGACA CCGCCATCGC CTCCGACGGT GGCACGGCGG CCGATGTGTT TGGCAAGGAC AGCAAGTTTG GTGGCAACCT GACCAAGCTG CTGGACAGCA ACGTCAATGC AACCAACGGC ACGCTGACCC TGCGCTCGGA CAGTTTGAAC AAGACCATCA AGGGCTACGA ATCGGACCTG GACGATCTCG ATGCGCGCAT GGAAAAACTC AGCGACCGCT ACACCGCGCA GTTCGCCGCG ATGGACGCCA TGATCAGCAA GTTGCAAGGC AGCACTAGCT CGCTCAGCGG CCTGCTGACA GGCTGA
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Protein sequence | MASVISTSAS GLDIPTVVST LVSRQRDPEQ ARINKAGTAA TTQLSAISQI KSSMTTLKSA LDKVVSSADT NAYKATVPTD AGFTATTTSS AAPGNYSVEV VSLASSQKLA SGAFKADATV GSGTLTIGYG DNSVTVDISG TDKLTDIAAA INKAAGGKGV TASVVTANDG QHLVFNAVDS GTKGALTISA SDPSLSSLTY GPGVTGGLNQ TVAAADARVR VDGFERTSSS DTISDIVPGV VLNLTKAAEG TKFNLGVAAD TSGLKGNLTA FAAAYNTANT LLAKSSSYDA TTKTASALTG DSLVRSLQQQ LRGQVSGSVT ELKALGLTID KDGVMSFDGS KFDTAIASDG GTAADVFGKD SKFGGNLTKL LDSNVNATNG TLTLRSDSLN KTIKGYESDL DDLDARMEKL SDRYTAQFAA MDAMISKLQG STSSLSGLLT G
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