| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_06127 |
|---|
| Symbol | |
|---|
| ID | 6306229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 2776807 |
|---|
| End bp | 2778720 |
|---|
| Gene Length | 1914 bp |
|---|
| Protein Length | 637 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642639990 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001913849 |
|---|
| Protein GI | 188576920 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.343201 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTGTTGC TCGTGCTGTT CCTGTGCGTA CCGTTGCTCG CGCAGGCCCA AGCCCAGGAA
CGGCCCGCGC CCACCGCTGC GGCACGCACG CAGGCCGACA CCAATGACAG CTTCGTGCGC
TATCGCGCCG ATTACGAAGT GCGCGCCGAC GCTAGCAGCG TAGAGACCGA CGAGTACGAG
ATCCTGCTCA AGACAAAGTC GGCGGTGGAG CAGTTCAGCC AGGTCCGGCT GAGTTACAGC
GAGAAGATGG AAACGCTGGA AGTGCTGCAG GCGTATACCG TCACGGTCGA AGGGCTGCGC
CAGGATGTGG CGGCCGACAA GATCTACACC CAGGAAAGCT ATTCCAGCGC CTCGGCGGCG
ATGTATGCCG ACCGCAAGGT CAAGGTCGTG GTGTTCCCGA ATCTGGCGCC GGGCGCGCGC
ATCGTCTACC GGGTGCGGCG AGCGCAGAGC ACGCCGTATT TCCCCGGCTA TTTCAGCCTG
TGGGAGACCT TCAGCGTGTT CGCGCAGTAC GACGATGCGG TGGTCACGCT GGTGGCGCCG
AAGTCGCTGC CGATGCATCT GTCGGTGCGT GGGTTGCAGG GGGGGACCAA GCCGGTCGTG
CGTGGCGACC AGGCGCGCTG GGAGTGGCGC TACCAGCGCA CCGCGCCGAT GAAGAATCAG
AACTGGAGTG CGGCCACCTG GGAGTTCAGC CCCACCTTGA TGGCGAGTAC CTTCGATAGC
TGGTCGCAGA TGGGCCTGGC GTATCACGTC AAGGGCGGGC GCGCCGCTGC GGTGACCCCG
GCGATCCAGG CGCTGGCCGA TGAGCTGACC CACGGCATCG ACGCACCGCG TGCGCAGGCA
GCCGCGCTCT ACGCCTGGGT CGCGCGCAAC ATCCGCTATG TCGCGGTGTA TCTGGGCAAT
GGCGGGCTGG AGCCCAACAG TGCCGACAGC ATCCTGGCCA ACCATTACGG TGATTGCAAA
GACCACACCG TGATCCTGGA AGCTTTGCTT GCGGCCAAGG GCATCGCCAG CACGCCAGTG
CTGATCGGCG CCGAGGGCGG CCCGACGCTG CCGGACATTC CGGTGCTGGG CCGCTTCAAT
CACGCCATTA CCTACATTCC CGCGTTCGAT CTGTATGTCG ATTCGACCAA CTCATATGCG
CGCTTCGGCC AGTTGCCGGC CGGCGATCTC GGTGCGCCGG TGGTGCATAC GCGCGACGGC
AAGGTGACGC AGACCCCGCC TAACGACCGC AAGGTCAATC GCTATGTTGC CCGCACTGAA
TACCGCTTCA CGCCGCAAGG CGGCCTGCAG GGCATGACCA CGCTCGACAG CGGGCAGACC
GGCGAAGTGG GCTTACGCGC GATGTTCGTG CAGCTCAATG CGCAGAATCG CAACCGCATC
GAAGAGTCGA TCCTCGCTCA GTCCGGTTTC GACGGCACCG GCGATCTGCT GATCCAGGGC
GACCCGCTGG ATCTGGATGC GCCATTCAAC TACCGCTACG CCTTCCAGGC CAAGGATGCG
GTGGATTTTT CCGTGGTCGG CGGCATGACC TTGCCGGACA TGCCCGGTGC CGAATCGATC
CGCGCGATCT ACACCACCAC CTCGGCCGAA GAGAATCTGA CCCCGTTCTA CTGCAACGAC
AGCGTGCGCG AAGAAACCTA CGTGGTGAGC TTCCCCGACA CGGTGCCGAT CATCGCCATC
CCGCGCAGCA GCACCTTCCG CAATGCCGCT GGCGAATATG TGGTCGATTG GACACGCGAT
GGGCAGACGG TGACCGCCGT GCATCGCTTG CAGCGCGCCG CCGTGCGTGG GCCGCAGGCG
TTGTGCCAGC CGCAGGATTA CCGCGCGTTC CGCGAGTTGT ACCAGCAGGT GCGGCGCGGC
TTTCGCGGGC AGATCGTGTA TGGCGATTTG TCCAAGGTGC AGACCGCGCA CTGA
|
|---|
| Protein sequence | MLLLVLFLCV PLLAQAQAQE RPAPTAAART QADTNDSFVR YRADYEVRAD ASSVETDEYE
ILLKTKSAVE QFSQVRLSYS EKMETLEVLQ AYTVTVEGLR QDVAADKIYT QESYSSASAA
MYADRKVKVV VFPNLAPGAR IVYRVRRAQS TPYFPGYFSL WETFSVFAQY DDAVVTLVAP
KSLPMHLSVR GLQGGTKPVV RGDQARWEWR YQRTAPMKNQ NWSAATWEFS PTLMASTFDS
WSQMGLAYHV KGGRAAAVTP AIQALADELT HGIDAPRAQA AALYAWVARN IRYVAVYLGN
GGLEPNSADS ILANHYGDCK DHTVILEALL AAKGIASTPV LIGAEGGPTL PDIPVLGRFN
HAITYIPAFD LYVDSTNSYA RFGQLPAGDL GAPVVHTRDG KVTQTPPNDR KVNRYVARTE
YRFTPQGGLQ GMTTLDSGQT GEVGLRAMFV QLNAQNRNRI EESILAQSGF DGTGDLLIQG
DPLDLDAPFN YRYAFQAKDA VDFSVVGGMT LPDMPGAESI RAIYTTTSAE ENLTPFYCND
SVREETYVVS FPDTVPIIAI PRSSTFRNAA GEYVVDWTRD GQTVTAVHRL QRAAVRGPQA
LCQPQDYRAF RELYQQVRRG FRGQIVYGDL SKVQTAH
|
|---|
| |