| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04886 |
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| Symbol | |
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| ID | 6305004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1489914 |
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| End bp | 1490339 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642638777 |
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| Product | pilin |
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| Protein accession | YP_001912654 |
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| Protein GI | 188575725 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.969324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAAGC AGCAAGGCTT TACACTTATC GAACTGATGA TCGTGGTCGC GATCATCGCC
ATCCTGGCTG CCATCGCGCT GCCGGCTTAT CAGGACTACA CCACTCGTGC CAAGCTCAGT
GAAGCGCTGA CGATGTCGGC GCCTGCCAAA CTTGCGGTAA CGGAGACTGC ATCGTCGCTC
GGCGGTGTTG CTAATGTTAC TCTCGCGAAT TCGGGCTACT CATTCCCGGG TGCCACGAAG
TATGTCAGCA ACGTCACCAT CGCCGATGGT ACGGGCCTAG TCACTGTAAC TTCTACCGTG
CCGAACGCAG CCGGTACCAT CCTGCTGACC CCGAAGGATG TCGGTGGCGG CCAGCTGAAG
TGGACCTGCT CTTCCGCCAT CCTCACCAAG TACCTGCCGG CGGAGTGCCG TAGCTCGGGC
ACCTGA
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| Protein sequence | MKKQQGFTLI ELMIVVAIIA ILAAIALPAY QDYTTRAKLS EALTMSAPAK LAVTETASSL
GGVANVTLAN SGYSFPGATK YVSNVTIADG TGLVTVTSTV PNAAGTILLT PKDVGGGQLK
WTCSSAILTK YLPAECRSSG T
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