| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04839 |
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| Symbol | |
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| ID | 6304983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1463065 |
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| End bp | 1464162 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642638756 |
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| Product | RND efflux membrane fusion protein |
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| Protein accession | YP_001912633 |
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| Protein GI | 188575704 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTATC GCGGCCTGGT GTGCGGCACG TTGCTGCTGG CACTAGCCGC CTGCAGCGGG
CCGGACGCGC CCGCCACCGA GACGCCGCGC GCGGTGAAGC TGGAGCGCTT TGGCGCCGGC
AGCGATAGCC CACTGCAGGT GCCGGCGCTG GTGCGCCAGG AACAACGCGC CGAGTTGGCG
TTCGAAGGGG CGGGCCGTCT TTCTGCGGTA TTGGTGGATG TGGGCGACCG CGTGACCCGC
GGGCAGGTGC TGGCGCGCCT GGACGATGAA CCGCTGCGGC TGCGCGAACA GCAGGCCGAC
GCACATGTGC GCGCGGCGCT GGCGCAGTCT GGCGAGCGGC AACTGCAACT GCGCCAACAA
CAGGCGATGT TCGATGACGG TGCCAGTTCT CATGCCACCT TGACTGCCGC GCGCGCAGCG
GCCGATGCCG CCAGCGCGCA GTTGCAGGCG GCCAGGGCCG ACCTGGCCAT GGCCCGCCGT
GGTACGCGTC TGGGCGAATT GCGCGCGCCG TTCGATGGCA GCGTGGTGGC ACGCCTGCAA
CAGCCGCAGG CCGATGTGGC AGCGGGGCAG ACGGTGCTGC AGGTGGAAGG GCAGGGCCAT
GTGCAACTGG TCGCCACGCT GCCGGCAGCT GCCGGCCCCG ATCTGGTGCC CGGGCAAACC
GTGCGCGCGC GTCTGGCTGA TGTAGGCGCC TTGCCGATCG CGCTGCGTGT GCGCAGTCTT
TCCAACCGCC TGGACAATGC CGCAACGGTA CAGGCGTTGC TCGAGCCGGT CGCTGTAGCG
CCTGCGCTGC GCAGCGGCGA CAGCGTGCTG CTGGCATTGC CCACACGTGC CGCTTCCACG
CCCAGCGTGC CGTTGTCGGC GGTCGTGCCG TGGCTCAATC GGCAACAGGC CAGCGTGTTC
GTTTACCAGC CGGCGAAGCG GGCCGTGATC GAACGTGCGG TCGACCTGGG GACGATCGTC
GGCGAGCGCG TCCAGATCCT GCGCGGGCTG CGTGCAGGCG AGCAGGTCGT CAGCGCCGGG
GTGGGCTTTC TGGTGAGCGG CCAGCCGGTG ACACCACTGC AGGTACAGAC CCAGCTGAGC
GGAGGTCGCT TGCCATGA
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| Protein sequence | MFYRGLVCGT LLLALAACSG PDAPATETPR AVKLERFGAG SDSPLQVPAL VRQEQRAELA
FEGAGRLSAV LVDVGDRVTR GQVLARLDDE PLRLREQQAD AHVRAALAQS GERQLQLRQQ
QAMFDDGASS HATLTAARAA ADAASAQLQA ARADLAMARR GTRLGELRAP FDGSVVARLQ
QPQADVAAGQ TVLQVEGQGH VQLVATLPAA AGPDLVPGQT VRARLADVGA LPIALRVRSL
SNRLDNAATV QALLEPVAVA PALRSGDSVL LALPTRAAST PSVPLSAVVP WLNRQQASVF
VYQPAKRAVI ERAVDLGTIV GERVQILRGL RAGEQVVSAG VGFLVSGQPV TPLQVQTQLS
GGRLP
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