| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04837 |
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| Symbol | |
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| ID | 6304981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1460744 |
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| End bp | 1462177 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642638754 |
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| Product | outer membrane channel protein |
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| Protein accession | YP_001912631 |
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| Protein GI | 188575702 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTGCCTGG TTGCCGCCAG TGCGGTGCTG GCGGCTGGGT GCTCGCTCAC GCCGGCCTAC
CAGCGCCCGG CGGTCAGCGT GCCGGCCACG TTCGGCAGTC CGCAGGCTGC ATCCGCGCCG
GCATCCGATC GGACCGACGC CAACGCGACG ACCACCGTCG CTTTGAACGA ACAAGCGCGC
GCGTTCTTGC AGCGCTTCGC ACCAGACCGC GACCTGCGGC CTCTGGTTGA ACGTGCGTTG
GCGCACAACG GCGATGTCCG CCGCGCTGCG TTGCAGGTAG AGCAGGCGCG TGCGCACTCC
GGTATCGCGC AGGCGTCGCG ACTGCCGGCG CTCGCCGTCG GCGCACAGCA GCTCCGGCAA
CATTTCGACA ACCCGGCGCT GGATGCGCGG TACCAGCAGG ACCTGGTGAT TGCCAATGCC
GGGATCGGCA ATTTCGAAGT GGATTTCTTT GGCAAGCTGC AGGCGATGTC CGAGGCCGCA
CGCCAGCGTT ACCTGGCCAG CACCTACGGC CGCGATGCCG CGCGTGGTGC CCTGATTGCT
GAGGTGCTGC GTGCCTACAC CGCCGAGCGC ACCACTGCGC AGGCGCTGCA ACAGCTGCAA
TCGCTCGATG CCGACAGCGC TGCGTTGCTT GCCATTGCCG AGCGGCACTA TCAGGTGGGG
CTGATTGCGC GCGACGAGCG CGATGCGCAG CGCCGTCAGG CCGATCAGGC CCATGTGGCG
GCCTTGCAGG GCAACGACAA TCACGCTGCG GCGGTGCGTG CGCTGCAGCT GCTGGTCGGC
TACGACAGCA CGCCGGTACC CGGCGATCTG CAGGGTCTGA TCGCTGCTGA TACGCCTGCC
AGTGCCTGGC GCGCCCTGGA TTCGTCGCTG TTGCTGCAAC GCCCGGACAT CCAGCAGGCC
GAGCTGGAGT TGCGCGCGGC CAATGCCGAT ATCGGCGCGG CGCGTGCGGC GTTTTTTCCG
TCGATCACCT TGAGCAGCAG CGTGGGCACT GCCAGCGACG GATTGAACGG TTTGTTTTCC
GCAGGCCACG GCTTGTGGAG CTTCATGCCG CAACTGAATC TGCCGTTGTT CGATGGTGGC
CGTAACCGCG CCAATCTGGA GTTGGCGCAG GTGCGCAAAC GCGCCGATGT CGTCGCCTAC
GAGCAGGTAA TCGAGTCTGC ATTTCGTGAG GTCGCCAACG CGCTCGACGC GCACGCCACT
TTGTCGCAGG CCGAGCCGCG CGCGCGCGCG CAGGTCGAAC GCGAGCAACT GCGTCTTGCG
CGAATGCACG CGCGCGTGGA TGCCGGTCTG GAAGACCGCA GCGCGCTGCT GGCCGAGCGT
ACGCGCATCG CCCAGACCGA ACTCGATTAC CTGGACACCG CACGTCAGCG CGTGCTGAGC
CGTATTGCGC TGTTTCAGGC GTTCTACGGC GTGCGCCTGC CCACCGCTTC CTGA
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| Protein sequence | MCLVAASAVL AAGCSLTPAY QRPAVSVPAT FGSPQAASAP ASDRTDANAT TTVALNEQAR
AFLQRFAPDR DLRPLVERAL AHNGDVRRAA LQVEQARAHS GIAQASRLPA LAVGAQQLRQ
HFDNPALDAR YQQDLVIANA GIGNFEVDFF GKLQAMSEAA RQRYLASTYG RDAARGALIA
EVLRAYTAER TTAQALQQLQ SLDADSAALL AIAERHYQVG LIARDERDAQ RRQADQAHVA
ALQGNDNHAA AVRALQLLVG YDSTPVPGDL QGLIAADTPA SAWRALDSSL LLQRPDIQQA
ELELRAANAD IGAARAAFFP SITLSSSVGT ASDGLNGLFS AGHGLWSFMP QLNLPLFDGG
RNRANLELAQ VRKRADVVAY EQVIESAFRE VANALDAHAT LSQAEPRARA QVEREQLRLA
RMHARVDAGL EDRSALLAER TRIAQTELDY LDTARQRVLS RIALFQAFYG VRLPTAS
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