Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04644 |
Symbol | pdxA |
ID | 6304646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 1141520 |
End bp | 1142488 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642638421 |
Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
Protein accession | YP_001912303 |
Protein GI | 188575374 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.172744 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCCCGT CGCTCGCGCT GGTGCCAGGC GAGCCGGCCG GAATCGGGCC AGAGCTTTGC GTCCGGCTCG CCCAGCGGCC GCGCCCGGAT GCGCATCTGA TTGCTTACGC CGATCCAGAT ACACTGCACA GCGCCGCAAA GTCGCTGTCT TTGTCTGTGC GCCTGCTCGA TCCAGACCAG CCTGCGCGCG CGCCCGGCGA CCTGCCACTG CATCCCGTTC GCCAAGCCGT GGCGACGCGC TTTGGCGCGC CCGACCCGGC CAACGCGGCG GCAGTGATTG CCGGTTTGCG CGGGGCCGCG GACGCCTGCC TCACCGGTCG ACTGCAGGGC ATCGTCACCG GTCCGGTGCA CAAGGCGGTG ATCAATGCCG GCGGCATCCC CTATACCGGC ACCACCGAAC TGCTGGCCGA CCACGCCGGC TGCCCGGTGG TGATGATGCT GGCCAACAGC ATCGTGCGCG TCGCGCTGGT GACGACCCAT CTGCCATTGC GTGCCGTCGC CGATGCGATC ACCGCCGATG CCCTGCAGCA GTGCCTGCGC ATCACCCACG CAGCGATGCA GCGCGACTTC GGTCTGGAGG ATCCGCGCAT CGCCGTGCTT GGCCTCAACC CGCATGCCGG CGAAGACGGA CTTCTGGGCC GCGAGGAACT GGATATCGTC ATTCCGGTCA TTGAGCAGCT GCGTGGCGAC GGCATGCACC TGATCGGCCC GCTGCCGGCC GACACCGCGT TTTTGCCGCA AAAGCTGGGC GGTTTCGATG CGGTGGTGGC GATGTATCAC GATCAGGGCC TGCCAGTGCT CAAATACAGT GGCTTCGAGC AGGCAGTGAA CATTACCCTG GGCCTGCCTT ACCCGCGCGT GGCCGTGGAT CACGGCACCG CGCTGGAACT GGCCGGCCGC AGAATCGCCG ACCCCTCCAG CCTGATGGCG GCCACCGCAC TGTGCGCGCG CTTGGCAGCA CGCCGCTAA
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Protein sequence | MVPSLALVPG EPAGIGPELC VRLAQRPRPD AHLIAYADPD TLHSAAKSLS LSVRLLDPDQ PARAPGDLPL HPVRQAVATR FGAPDPANAA AVIAGLRGAA DACLTGRLQG IVTGPVHKAV INAGGIPYTG TTELLADHAG CPVVMMLANS IVRVALVTTH LPLRAVADAI TADALQQCLR ITHAAMQRDF GLEDPRIAVL GLNPHAGEDG LLGREELDIV IPVIEQLRGD GMHLIGPLPA DTAFLPQKLG GFDAVVAMYH DQGLPVLKYS GFEQAVNITL GLPYPRVAVD HGTALELAGR RIADPSSLMA ATALCARLAA RR
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