Gene PXO_04579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_04579 
Symbol 
ID6304709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand- 
Start bp1197518 
End bp1198504 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content65% 
IMG OID642638483 
Productexodeoxyribonuclease IX 
Protein accessionYP_001912365 
Protein GI188575436 
COG category[L] Replication, recombination and repair 
COG ID[COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCACAC CGACCATTCC GTTCGACGCT GCACCCCAGG CGACCCCACG TCCAACGCCG 
CTGTATCTGG TGGATGCCAG CCTGTACGTG TTCCGTGCCT GGCATTCCAT TCCGGACGAA 
TTCCAGGATG CGCAGGGCTG GTCGACCAAT GCGGTGCACG GGTTTGCGCG GTTTCTGCTG 
GACGTGCTCG AACGCGAAAA CCCGCAGCAC ATCACCATTG CCTTCGACGA AGCGCTGGAC 
AGTTGCTTTC GGCATGCGAT CTACCCGGCC TACAAAGGCA ACCGCACGCC TGCGCCGGAT 
GCGTTGCGCC GCCAGTTTGC GCATTGCAAG GCACTGTGCG CAGCGCTGGG GCTGAGCGTG 
CTGGCCCACC GCGATTACGA GGCCGACGAT CTGATCGGCA GCGCACTGCA CAGCGTGCGC 
GCGCATGGTT TGCGCGGGGT GATCGTGTCG GCCGACAAGG ACTTGTCGCA GCTATTGCTC 
GAACATGACG AGCAATGGGA TTACGCGCGC AACCAGCGCT GGAGCATGGA CGGGGTGAAG 
GCGCGCCATG GCGTGCATGC GCACCAGATC GCCGACTACC TGGCGTTGTG CGGCGATGCC 
ATCGACAACA TTCCCGGCGT CACCGGCATC GGCGCCAAAT CGGCGGCGGT GCTGCTGGCG 
CACTTCGGCA GCCTGGATGC GCTGTTGGAA CGCATCGACG AAATCCCCTT CCTGCGCCTG 
CGCGGCGCTG CGCAAATGGC AGTACGGCTG CGCGAACAGC GCGAACACGC GCTGCTGTGG 
CGGCAGCTCA CCACCATTGC GCTCGACGCG CCGCTGGCGC TCACCGAAAC CGGCTTCACG 
CGTGCGCACG CCGATGCGGG CATGCTGACC GGCTTGTGCG AGAGCCTGCG CTTCGGCCCC 
CTCACCCGAC GCCGTTTGCT GGCCGCAAGC ACCGGCGTGG CCGCACCGTT TCCTTCCGTT 
TCCCTTGCAC AAGGTCCGCA CCCATGA
 
Protein sequence
MTTPTIPFDA APQATPRPTP LYLVDASLYV FRAWHSIPDE FQDAQGWSTN AVHGFARFLL 
DVLERENPQH ITIAFDEALD SCFRHAIYPA YKGNRTPAPD ALRRQFAHCK ALCAALGLSV 
LAHRDYEADD LIGSALHSVR AHGLRGVIVS ADKDLSQLLL EHDEQWDYAR NQRWSMDGVK 
ARHGVHAHQI ADYLALCGDA IDNIPGVTGI GAKSAAVLLA HFGSLDALLE RIDEIPFLRL 
RGAAQMAVRL REQREHALLW RQLTTIALDA PLALTETGFT RAHADAGMLT GLCESLRFGP 
LTRRRLLAAS TGVAAPFPSV SLAQGPHP